Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 IGKV1-32-201ENST00000519290 311 ntBASIC4.43□□□□□ -1.7
LIM2P55344 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
LIM2P55344 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.43□□□□□ -1.7
LIM2P55344 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.43□□□□□ -1.7
LIM2P55344 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.43□□□□□ -1.7
LIM2P55344 AC105129.1-201ENST00000560250 297 ntBASIC4.43□□□□□ -1.7
LIM2P55344 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.43□□□□□ -1.7
LIM2P55344 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.43□□□□□ -1.7
LIM2P55344 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LIM2P55344 AC100827.5-201ENST00000615883 426 ntBASIC4.43□□□□□ -1.7
LIM2P55344 AC009032.1-201ENST00000617574 431 ntBASIC4.43□□□□□ -1.7
LIM2P55344 AC104820.1-201ENST00000624183 307 ntBASIC4.43□□□□□ -1.7
LIM2P55344 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.43□□□□□ -1.7
LIM2P55344 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.43□□□□□ -1.7
LIM2P55344 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.43□□□□□ -1.7
LIM2P55344 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LIM2P55344 AP001284.1-201ENST00000528393 2118 ntBASIC4.43□□□□□ -1.7
LIM2P55344 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LIM2P55344 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.43□□□□□ -1.7
LIM2P55344 AL031119.1-201ENST00000404707 1879 ntBASIC4.43□□□□□ -1.7
LIM2P55344 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LIM2P55344 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LIM2P55344 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LIM2P55344 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.42□□□□□ -1.7
LIM2P55344 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.42□□□□□ -1.7
LIM2P55344 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LIM2P55344 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LIM2P55344 AC010132.2-201ENST00000295493 1043 ntBASIC4.42□□□□□ -1.7
LIM2P55344 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LIM2P55344 MT-RNR1-201ENST00000389680 954 ntBASIC4.42□□□□□ -1.7
LIM2P55344 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
LIM2P55344 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LIM2P55344 MIR298-201ENST00000401212 88 ntBASIC4.42□□□□□ -1.7
LIM2P55344 SNORA79B-201ENST00000410557 148 ntBASIC4.42□□□□□ -1.7
LIM2P55344 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.42□□□□□ -1.7
LIM2P55344 MTND4LP13-201ENST00000425022 298 ntBASIC4.42□□□□□ -1.7
LIM2P55344 AL445528.1-201ENST00000426330 420 ntBASIC4.42□□□□□ -1.7
LIM2P55344 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.42□□□□□ -1.7
LIM2P55344 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.42□□□□□ -1.7
LIM2P55344 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.42□□□□□ -1.7
LIM2P55344 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.42□□□□□ -1.7
LIM2P55344 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.42□□□□□ -1.7
LIM2P55344 AC107015.1-201ENST00000466902 747 ntBASIC4.42□□□□□ -1.7
LIM2P55344 AC006967.1-201ENST00000467608 589 ntBASIC4.42□□□□□ -1.7
LIM2P55344 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.42□□□□□ -1.7
LIM2P55344 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.42□□□□□ -1.7
LIM2P55344 AL671862.1-201ENST00000515851 349 ntBASIC4.42□□□□□ -1.7
LIM2P55344 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.42□□□□□ -1.7
LIM2P55344 AC026616.1-201ENST00000523157 525 ntBASIC4.42□□□□□ -1.7
LIM2P55344 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.42□□□□□ -1.7
LIM2P55344 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LIM2P55344 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.42□□□□□ -1.7
LIM2P55344 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LIM2P55344 MIR4270-201ENST00000581799 70 ntBASIC4.42□□□□□ -1.7
LIM2P55344 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.42□□□□□ -1.7
LIM2P55344 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.42□□□□□ -1.7
LIM2P55344 AC234782.5-201ENST00000617723 324 ntBASIC4.42□□□□□ -1.7
LIM2P55344 RMST_5.1-201ENST00000618704 126 ntBASIC4.42□□□□□ -1.7
LIM2P55344 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.42□□□□□ -1.7
LIM2P55344 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.42□□□□□ -1.7
LIM2P55344 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LIM2P55344 AC119674.1-220ENST00000641502 1048 ntBASIC4.42□□□□□ -1.7
LIM2P55344 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LIM2P55344 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LIM2P55344 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.42□□□□□ -1.7
LIM2P55344 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.42□□□□□ -1.7
LIM2P55344 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LIM2P55344 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.41□□□□□ -1.7
LIM2P55344 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LIM2P55344 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LIM2P55344 RNU6-1320P-201ENST00000390838 107 ntBASIC4.41□□□□□ -1.7
LIM2P55344 RNU6-1269P-201ENST00000391139 107 ntBASIC4.41□□□□□ -1.7
LIM2P55344 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LIM2P55344 ATG4AP1-201ENST00000416893 538 ntBASIC4.41□□□□□ -1.7
LIM2P55344 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.41□□□□□ -1.7
LIM2P55344 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.41□□□□□ -1.7
LIM2P55344 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.41□□□□□ -1.7
LIM2P55344 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.41□□□□□ -1.7
LIM2P55344 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.41□□□□□ -1.7
LIM2P55344 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.41□□□□□ -1.7
LIM2P55344 RNU6-599P-201ENST00000459383 107 ntBASIC4.41□□□□□ -1.7
LIM2P55344 RNU6-1193P-201ENST00000459461 107 ntBASIC4.41□□□□□ -1.7
LIM2P55344 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LIM2P55344 RN7SL346P-201ENST00000491561 294 ntBASIC4.41□□□□□ -1.7
LIM2P55344 RPL36AP41-201ENST00000493820 306 ntBASIC4.41□□□□□ -1.7
LIM2P55344 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.41□□□□□ -1.7
LIM2P55344 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.41□□□□□ -1.7
LIM2P55344 RNU6-362P-201ENST00000516736 90 ntBASIC4.41□□□□□ -1.7
LIM2P55344 AP000859.1-201ENST00000525536 307 ntBASIC4.41□□□□□ -1.7
LIM2P55344 OR5M2P-201ENST00000529003 936 ntBASIC4.41□□□□□ -1.7
LIM2P55344 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.41□□□□□ -1.7
LIM2P55344 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.41□□□□□ -1.7
LIM2P55344 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.41□□□□□ -1.7
LIM2P55344 AC130352.1-201ENST00000602979 661 ntBASIC4.41□□□□□ -1.7
LIM2P55344 AC073091.2-201ENST00000603205 907 ntBASIC4.41□□□□□ -1.7
LIM2P55344 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC4.41□□□□□ -1.7
LIM2P55344 RNU6-368P-201ENST00000620928 107 ntBASIC4.41□□□□□ -1.7
LIM2P55344 AC015722.2-201ENST00000622210 551 ntBASIC4.41□□□□□ -1.7
LIM2P55344 RNU6-538P-201ENST00000622329 107 ntBASIC4.41□□□□□ -1.7
LIM2P55344 AC005086.4-201ENST00000623065 213 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms