Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
COL5A1P20908 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.38□□□□□ -1.71
COL5A1P20908 AL359922.3-201ENST00000624779 1670 ntBASIC4.38□□□□□ -1.71
COL5A1P20908 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
COL5A1P20908 EIF2AP4-201ENST00000424793 1781 ntBASIC4.38□□□□□ -1.71
COL5A1P20908 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL5A1P20908 OR5P1P-201ENST00000299512 925 ntBASIC4.38□□□□□ -1.71
COL5A1P20908 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.38□□□□□ -1.71
COL5A1P20908 GTF3AP5-201ENST00000442645 697 ntBASIC4.38□□□□□ -1.71
COL5A1P20908 RPL35P6-201ENST00000490024 372 ntBASIC4.38□□□□□ -1.71
COL5A1P20908 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.38□□□□□ -1.71
COL5A1P20908 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.38□□□□□ -1.71
COL5A1P20908 AC026726.1-201ENST00000512859 601 ntBASIC4.38□□□□□ -1.71
COL5A1P20908 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.38□□□□□ -1.71
COL5A1P20908 AC138832.1-201ENST00000522871 556 ntBASIC4.38□□□□□ -1.71
COL5A1P20908 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.38□□□□□ -1.71
COL5A1P20908 BNIP3P19-201ENST00000605397 577 ntBASIC4.38□□□□□ -1.71
COL5A1P20908 AC090506.2-201ENST00000624521 419 ntBASIC4.38□□□□□ -1.71
COL5A1P20908 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.38□□□□□ -1.71
COL5A1P20908 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.38□□□□□ -1.71
COL5A1P20908 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL5A1P20908 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL5A1P20908 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
COL5A1P20908 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
COL5A1P20908 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL5A1P20908 RPL21P65-201ENST00000406094 466 ntBASIC4.37□□□□□ -1.71
COL5A1P20908 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.37□□□□□ -1.71
COL5A1P20908 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.37□□□□□ -1.71
COL5A1P20908 BTF3P10-201ENST00000433415 495 ntBASIC4.37□□□□□ -1.71
COL5A1P20908 AC104651.2-201ENST00000447549 528 ntBASIC4.37□□□□□ -1.71
COL5A1P20908 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.37□□□□□ -1.71
COL5A1P20908 ISCUP1-201ENST00000454451 448 ntBASIC4.37□□□□□ -1.71
COL5A1P20908 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL5A1P20908 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.37□□□□□ -1.71
COL5A1P20908 RN7SL691P-201ENST00000494487 301 ntBASIC4.37□□□□□ -1.71
COL5A1P20908 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.37□□□□□ -1.71
COL5A1P20908 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.37□□□□□ -1.71
COL5A1P20908 RNA5SP303-201ENST00000516192 130 ntBASIC4.37□□□□□ -1.71
COL5A1P20908 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.37□□□□□ -1.71
COL5A1P20908 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.37□□□□□ -1.71
COL5A1P20908 AC009852.2-201ENST00000567898 485 ntBASIC4.37□□□□□ -1.71
COL5A1P20908 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.37□□□□□ -1.71
COL5A1P20908 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL5A1P20908 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL5A1P20908 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL5A1P20908 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
COL5A1P20908 AL031595.2-201ENST00000624215 19071 ntBASIC4.37□□□□□ -1.71
COL5A1P20908 DDX18P5-201ENST00000534547 1306 ntBASIC4.37□□□□□ -1.71
COL5A1P20908 THAP12P5-201ENST00000405864 2275 ntBASIC4.37□□□□□ -1.71
COL5A1P20908 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL5A1P20908 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
COL5A1P20908 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.37□□□□□ -1.71
COL5A1P20908 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.37□□□□□ -1.71
COL5A1P20908 RN7SL132P-201ENST00000478131 296 ntBASIC4.37□□□□□ -1.71
COL5A1P20908 AC006499.6-201ENST00000511169 607 ntBASIC4.37□□□□□ -1.71
COL5A1P20908 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.37□□□□□ -1.71
COL5A1P20908 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.37□□□□□ -1.71
COL5A1P20908 AC113403.1-201ENST00000604910 193 ntBASIC4.37□□□□□ -1.71
COL5A1P20908 AP003400.2-201ENST00000624036 666 ntBASIC4.37□□□□□ -1.71
COL5A1P20908 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
COL5A1P20908 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.37□□□□□ -1.71
COL5A1P20908 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL5A1P20908 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
COL5A1P20908 AC000374.1-201ENST00000434698 1745 ntBASIC4.36□□□□□ -1.71
COL5A1P20908 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
COL5A1P20908 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL5A1P20908 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
COL5A1P20908 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL5A1P20908 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
COL5A1P20908 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL5A1P20908 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL5A1P20908 SNORA62.3-201ENST00000365110 153 ntBASIC4.36□□□□□ -1.71
COL5A1P20908 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.36□□□□□ -1.71
COL5A1P20908 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC4.36□□□□□ -1.71
COL5A1P20908 OR13Z1P-201ENST00000416141 834 ntBASIC4.36□□□□□ -1.71
COL5A1P20908 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.36□□□□□ -1.71
COL5A1P20908 HMGN2P27-201ENST00000427352 270 ntBASIC4.36□□□□□ -1.71
COL5A1P20908 RRM2P4-201ENST00000441721 562 ntBASIC4.36□□□□□ -1.71
COL5A1P20908 RPL23AP43-201ENST00000446445 471 ntBASIC4.36□□□□□ -1.71
COL5A1P20908 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.36□□□□□ -1.71
COL5A1P20908 PRSS3P4-201ENST00000453323 162 ntBASIC4.36□□□□□ -1.71
COL5A1P20908 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC4.36□□□□□ -1.71
COL5A1P20908 AC090686.1-201ENST00000481577 749 ntBASIC4.36□□□□□ -1.71
COL5A1P20908 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.36□□□□□ -1.71
COL5A1P20908 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.36□□□□□ -1.71
COL5A1P20908 AC130352.1-201ENST00000602979 661 ntBASIC4.36□□□□□ -1.71
COL5A1P20908 uc_338.13-201ENST00000618243 179 ntBASIC4.36□□□□□ -1.71
COL5A1P20908 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.36□□□□□ -1.71
COL5A1P20908 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.36□□□□□ -1.71
COL5A1P20908 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL5A1P20908 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
COL5A1P20908 AL391684.1-202ENST00000641293 1636 ntBASIC4.36□□□□□ -1.71
COL5A1P20908 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
COL5A1P20908 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.36□□□□□ -1.71
COL5A1P20908 AC010266.2-201ENST00000564741 3255 ntBASIC4.36□□□□□ -1.71
COL5A1P20908 TET1P1-201ENST00000426627 2301 ntBASIC4.36□□□□□ -1.71
COL5A1P20908 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
COL5A1P20908 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
COL5A1P20908 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL5A1P20908 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms