Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.61□□□□□ -1.67
HMGA1P17096 UBE2V1P3-201ENST00000439651 417 ntBASIC4.61□□□□□ -1.67
HMGA1P17096 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.61□□□□□ -1.67
HMGA1P17096 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.61□□□□□ -1.67
HMGA1P17096 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HMGA1P17096 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.61□□□□□ -1.67
HMGA1P17096 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HMGA1P17096 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HMGA1P17096 RN7SL691P-201ENST00000494487 301 ntBASIC4.61□□□□□ -1.67
HMGA1P17096 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.61□□□□□ -1.67
HMGA1P17096 RNA5SP497-201ENST00000516081 97 ntBASIC4.61□□□□□ -1.67
HMGA1P17096 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.61□□□□□ -1.67
HMGA1P17096 AL109766.1-201ENST00000555080 552 ntBASIC4.61□□□□□ -1.67
HMGA1P17096 MIR3160-1-201ENST00000577972 85 ntBASIC4.61□□□□□ -1.67
HMGA1P17096 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.61□□□□□ -1.67
HMGA1P17096 IPO5P1-202ENST00000600039 287 ntBASIC4.61□□□□□ -1.67
HMGA1P17096 AC092653.1-201ENST00000608509 531 ntBASIC4.61□□□□□ -1.67
HMGA1P17096 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.61□□□□□ -1.67
HMGA1P17096 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HMGA1P17096 MIR8069-1-201ENST00000616627 86 ntBASIC4.61□□□□□ -1.67
HMGA1P17096 MIR8069-2-201ENST00000621412 86 ntBASIC4.61□□□□□ -1.67
HMGA1P17096 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
HMGA1P17096 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HMGA1P17096 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.61□□□□□ -1.67
HMGA1P17096 SMG1P4-204ENST00000523028 4131 ntBASIC4.61□□□□□ -1.67
HMGA1P17096 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HMGA1P17096 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HMGA1P17096 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.61□□□□□ -1.67
HMGA1P17096 AL158163.1-201ENST00000603915 1649 ntBASIC4.61□□□□□ -1.67
HMGA1P17096 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HMGA1P17096 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
HMGA1P17096 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
HMGA1P17096 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
HMGA1P17096 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
HMGA1P17096 AL121657.1-201ENST00000327215 531 ntBASIC4.6□□□□□ -1.67
HMGA1P17096 RN7SKP227-201ENST00000364445 330 ntBASIC4.6□□□□□ -1.67
HMGA1P17096 RNU1-63P-201ENST00000383902 164 ntBASIC4.6□□□□□ -1.67
HMGA1P17096 SNORA70C-201ENST00000384538 135 ntBASIC4.6□□□□□ -1.67
HMGA1P17096 AL583835.1-201ENST00000399570 407 ntBASIC4.6□□□□□ -1.67
HMGA1P17096 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.6□□□□□ -1.67
HMGA1P17096 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.6□□□□□ -1.67
HMGA1P17096 RPS26P2-201ENST00000440331 348 ntBASIC4.6□□□□□ -1.67
HMGA1P17096 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HMGA1P17096 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HMGA1P17096 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.6□□□□□ -1.67
HMGA1P17096 AC138938.1-201ENST00000515431 782 ntBASIC4.6□□□□□ -1.67
HMGA1P17096 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.6□□□□□ -1.67
HMGA1P17096 MRPL49P2-201ENST00000521066 465 ntBASIC4.6□□□□□ -1.67
HMGA1P17096 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.6□□□□□ -1.67
HMGA1P17096 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.6□□□□□ -1.67
HMGA1P17096 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.6□□□□□ -1.67
HMGA1P17096 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.6□□□□□ -1.67
HMGA1P17096 RN7SL435P-201ENST00000584418 282 ntBASIC4.6□□□□□ -1.67
HMGA1P17096 AP002360.3-201ENST00000607673 710 ntBASIC4.6□□□□□ -1.67
HMGA1P17096 AC140479.6-201ENST00000633535 357 ntBASIC4.6□□□□□ -1.67
HMGA1P17096 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HMGA1P17096 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.6□□□□□ -1.67
HMGA1P17096 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
HMGA1P17096 Z95331.1-201ENST00000623075 23112 ntBASIC4.6□□□□□ -1.67
HMGA1P17096 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.6□□□□□ -1.67
HMGA1P17096 AC000374.1-201ENST00000434698 1745 ntBASIC4.6□□□□□ -1.67
HMGA1P17096 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.6□□□□□ -1.67
HMGA1P17096 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HMGA1P17096 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HMGA1P17096 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HMGA1P17096 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HMGA1P17096 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
HMGA1P17096 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HMGA1P17096 YES1-203ENST00000577961 4554 ntTSL 5 BASIC4.59□□□□□ -1.67
HMGA1P17096 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.67
HMGA1P17096 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.59□□□□□ -1.67
HMGA1P17096 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.59□□□□□ -1.67
HMGA1P17096 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.59□□□□□ -1.67
HMGA1P17096 RPS27AP12-201ENST00000429552 465 ntBASIC4.59□□□□□ -1.67
HMGA1P17096 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.59□□□□□ -1.67
HMGA1P17096 AL031584.1-201ENST00000447169 754 ntBASIC4.59□□□□□ -1.67
HMGA1P17096 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.59□□□□□ -1.67
HMGA1P17096 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.59□□□□□ -1.67
HMGA1P17096 RPL7P19-201ENST00000469948 618 ntBASIC4.59□□□□□ -1.67
HMGA1P17096 AC108475.1-201ENST00000507880 950 ntBASIC4.59□□□□□ -1.67
HMGA1P17096 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.59□□□□□ -1.67
HMGA1P17096 ATP1B1P1-201ENST00000509767 915 ntBASIC4.59□□□□□ -1.67
HMGA1P17096 PARP4P3-201ENST00000510265 317 ntBASIC4.59□□□□□ -1.67
HMGA1P17096 SNORA31.9-201ENST00000516429 84 ntBASIC4.59□□□□□ -1.67
HMGA1P17096 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.59□□□□□ -1.67
HMGA1P17096 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
HMGA1P17096 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.59□□□□□ -1.67
HMGA1P17096 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.59□□□□□ -1.67
HMGA1P17096 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC4.59□□□□□ -1.67
HMGA1P17096 AC103968.1-201ENST00000557841 573 ntBASIC4.59□□□□□ -1.67
HMGA1P17096 AC007224.1-201ENST00000564410 144 ntBASIC4.59□□□□□ -1.67
HMGA1P17096 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
HMGA1P17096 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.59□□□□□ -1.67
HMGA1P17096 RN7SL176P-201ENST00000580352 264 ntBASIC4.59□□□□□ -1.67
HMGA1P17096 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.59□□□□□ -1.67
HMGA1P17096 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
HMGA1P17096 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
HMGA1P17096 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
HMGA1P17096 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.59□□□□□ -1.68
HMGA1P17096 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms