Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.51□□□□□ -1.53
TRIM38O00635 AC095057.3-201ENST00000567102 1157 ntBASIC5.51□□□□□ -1.53
TRIM38O00635 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.51□□□□□ -1.53
TRIM38O00635 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM38O00635 AL022067.1-201ENST00000602426 454 ntBASIC5.51□□□□□ -1.53
TRIM38O00635 AC068790.2-201ENST00000602601 557 ntBASIC5.51□□□□□ -1.53
TRIM38O00635 AL022161.1-201ENST00000604390 213 ntBASIC5.51□□□□□ -1.53
TRIM38O00635 AC080013.6-201ENST00000606185 215 ntBASIC5.51□□□□□ -1.53
TRIM38O00635 AL445222.1-201ENST00000607259 628 ntBASIC5.51□□□□□ -1.53
TRIM38O00635 AC010632.3-201ENST00000611377 369 ntBASIC5.51□□□□□ -1.53
TRIM38O00635 uc_338.9-201ENST00000617424 182 ntBASIC5.51□□□□□ -1.53
TRIM38O00635 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC5.51□□□□□ -1.53
TRIM38O00635 AC024595.1-201ENST00000623088 387 ntBASIC5.51□□□□□ -1.53
TRIM38O00635 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.51□□□□□ -1.53
TRIM38O00635 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.51□□□□□ -1.53
TRIM38O00635 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.51□□□□□ -1.53
TRIM38O00635 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.51□□□□□ -1.53
TRIM38O00635 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM38O00635 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM38O00635 AL137100.1-201ENST00000556703 1620 ntBASIC5.51□□□□□ -1.53
TRIM38O00635 AC096656.1-201ENST00000623826 1364 ntBASIC5.51□□□□□ -1.53
TRIM38O00635 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM38O00635 AC083899.1-201ENST00000454465 3819 ntBASIC5.51□□□□□ -1.53
TRIM38O00635 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.51□□□□□ -1.53
TRIM38O00635 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
TRIM38O00635 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM38O00635 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM38O00635 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
TRIM38O00635 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM38O00635 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM38O00635 AC092681.1-201ENST00000297369 291 ntBASIC5.5□□□□□ -1.53
TRIM38O00635 ENSAP3-201ENST00000312710 333 ntBASIC5.5□□□□□ -1.53
TRIM38O00635 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.5□□□□□ -1.53
TRIM38O00635 RNA5SP183-201ENST00000362452 119 ntBASIC5.5□□□□□ -1.53
TRIM38O00635 RNU6-249P-201ENST00000363016 102 ntBASIC5.5□□□□□ -1.53
TRIM38O00635 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
TRIM38O00635 U3.28-201ENST00000391249 210 ntBASIC5.5□□□□□ -1.53
TRIM38O00635 ZNF602P-201ENST00000405929 924 ntBASIC5.5□□□□□ -1.53
TRIM38O00635 RN7SKP273-201ENST00000411392 314 ntBASIC5.5□□□□□ -1.53
TRIM38O00635 MTCO2P8-201ENST00000412213 658 ntBASIC5.5□□□□□ -1.53
TRIM38O00635 TRGV6-201ENST00000417928 299 ntBASIC5.5□□□□□ -1.53
TRIM38O00635 SLC35E1P1-201ENST00000419313 864 ntBASIC5.5□□□□□ -1.53
TRIM38O00635 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.5□□□□□ -1.53
TRIM38O00635 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM38O00635 RPS27P18-201ENST00000431701 247 ntBASIC5.5□□□□□ -1.53
TRIM38O00635 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.5□□□□□ -1.53
TRIM38O00635 CYCSP6-201ENST00000434498 302 ntBASIC5.5□□□□□ -1.53
TRIM38O00635 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM38O00635 RPL12P18-201ENST00000437175 325 ntBASIC5.5□□□□□ -1.53
TRIM38O00635 MTND4P32-201ENST00000437189 1237 ntBASIC5.5□□□□□ -1.53
TRIM38O00635 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM38O00635 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.5□□□□□ -1.53
TRIM38O00635 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM38O00635 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM38O00635 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM38O00635 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM38O00635 RPS7P6-201ENST00000485777 579 ntBASIC5.5□□□□□ -1.53
TRIM38O00635 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM38O00635 RN7SL808P-201ENST00000496066 299 ntBASIC5.5□□□□□ -1.53
TRIM38O00635 AC072052.1-201ENST00000496556 306 ntBASIC5.5□□□□□ -1.53
TRIM38O00635 AC231760.1-201ENST00000498002 260 ntBASIC5.5□□□□□ -1.53
TRIM38O00635 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM38O00635 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.5□□□□□ -1.53
TRIM38O00635 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM38O00635 PTS-202ENST00000524931 696 ntTSL 3 BASIC5.5□□□□□ -1.53
TRIM38O00635 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.5□□□□□ -1.53
TRIM38O00635 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC5.5□□□□□ -1.53
TRIM38O00635 AL049779.2-201ENST00000553847 315 ntBASIC5.5□□□□□ -1.53
TRIM38O00635 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM38O00635 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.5□□□□□ -1.53
TRIM38O00635 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.5□□□□□ -1.53
TRIM38O00635 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.5□□□□□ -1.53
TRIM38O00635 MIR4700-201ENST00000578311 74 ntBASIC5.5□□□□□ -1.53
TRIM38O00635 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
TRIM38O00635 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
TRIM38O00635 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC5.5□□□□□ -1.53
TRIM38O00635 AC098935.2-201ENST00000604222 466 ntBASIC5.5□□□□□ -1.53
TRIM38O00635 AL139124.1-201ENST00000609123 421 ntBASIC5.5□□□□□ -1.53
TRIM38O00635 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM38O00635 AC112694.2-201ENST00000623697 768 ntBASIC5.5□□□□□ -1.53
TRIM38O00635 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM38O00635 CASC19-222ENST00000641321 1173 ntBASIC5.5□□□□□ -1.53
TRIM38O00635 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM38O00635 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM38O00635 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM38O00635 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM38O00635 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM38O00635 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM38O00635 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM38O00635 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM38O00635 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM38O00635 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM38O00635 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.5□□□□□ -1.53
TRIM38O00635 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM38O00635 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM38O00635 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM38O00635 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM38O00635 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.5□□□□□ -1.53
TRIM38O00635 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM38O00635 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms