Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 AC112255.1-201ENST00000624070 2493 ntBASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 MTCO1P15-201ENST00000529569 1526 ntBASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM49D1C9J1S8 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.5□□□□□ -1.69
TRIM49D1C9J1S8 AC093909.5-201ENST00000621839 1799 ntBASIC4.5□□□□□ -1.69
TRIM49D1C9J1S8 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM49D1C9J1S8 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
TRIM49D1C9J1S8 AC108467.2-201ENST00000617640 1597 ntBASIC4.5□□□□□ -1.69
TRIM49D1C9J1S8 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
TRIM49D1C9J1S8 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC4.5□□□□□ -1.69
TRIM49D1C9J1S8 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
TRIM49D1C9J1S8 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.5□□□□□ -1.69
TRIM49D1C9J1S8 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.5□□□□□ -1.69
TRIM49D1C9J1S8 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.5□□□□□ -1.69
TRIM49D1C9J1S8 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.5□□□□□ -1.69
TRIM49D1C9J1S8 GEMIN8P3-201ENST00000445417 720 ntBASIC4.5□□□□□ -1.69
TRIM49D1C9J1S8 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC4.5□□□□□ -1.69
TRIM49D1C9J1S8 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.5□□□□□ -1.69
TRIM49D1C9J1S8 OR5M14P-201ENST00000506803 618 ntBASIC4.5□□□□□ -1.69
TRIM49D1C9J1S8 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.5□□□□□ -1.69
TRIM49D1C9J1S8 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
TRIM49D1C9J1S8 AC015795.1-201ENST00000513669 327 ntBASIC4.5□□□□□ -1.69
TRIM49D1C9J1S8 AC110775.1-201ENST00000513721 462 ntBASIC4.5□□□□□ -1.69
TRIM49D1C9J1S8 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.5□□□□□ -1.69
TRIM49D1C9J1S8 AC022882.1-201ENST00000532142 501 ntBASIC4.5□□□□□ -1.69
TRIM49D1C9J1S8 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.5□□□□□ -1.69
TRIM49D1C9J1S8 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC4.5□□□□□ -1.69
TRIM49D1C9J1S8 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.5□□□□□ -1.69
TRIM49D1C9J1S8 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC4.5□□□□□ -1.69
TRIM49D1C9J1S8 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.5□□□□□ -1.69
TRIM49D1C9J1S8 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.5□□□□□ -1.69
TRIM49D1C9J1S8 AL161912.3-201ENST00000605404 628 ntBASIC4.5□□□□□ -1.69
TRIM49D1C9J1S8 AF117829.2-201ENST00000619538 361 ntBASIC4.5□□□□□ -1.69
TRIM49D1C9J1S8 AC007546.2-201ENST00000623996 360 ntBASIC4.5□□□□□ -1.69
TRIM49D1C9J1S8 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM49D1C9J1S8 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.5□□□□□ -1.69
TRIM49D1C9J1S8 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.5□□□□□ -1.69
TRIM49D1C9J1S8 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.5□□□□□ -1.69
TRIM49D1C9J1S8 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 LINC00622-201ENST00000562811 1570 ntBASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 RNU1-15P-201ENST00000353977 144 ntBASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 RNA5SP52-201ENST00000362448 134 ntBASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 RNA5SP307-201ENST00000362863 116 ntBASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 OR2X1P-201ENST00000421144 687 ntBASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 AC016831.4-201ENST00000438302 307 ntBASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 RPL7P33-201ENST00000444159 742 ntBASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 RN7SKP276-201ENST00000516242 268 ntBASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 RPL26P30-202ENST00000602923 645 ntBASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 AC073091.2-201ENST00000603205 907 ntBASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 Z98200.1-201ENST00000607298 470 ntBASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 AC211433.2-201ENST00000608433 387 ntBASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 AC107308.1-201ENST00000615897 301 ntBASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 TMEM30CP-203ENST00000637814 1035 ntBASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 KARSP3-201ENST00000571212 1504 ntBASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM49D1C9J1S8 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms