Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 RNA5SP130-201ENST00000364431 114 ntBASIC5.7□□□□□ -1.5
RGPD3A6NKT7 AC009506.2-201ENST00000420635 840 ntBASIC5.7□□□□□ -1.5
RGPD3A6NKT7 ARL4AP4-201ENST00000434170 518 ntBASIC5.7□□□□□ -1.5
RGPD3A6NKT7 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
RGPD3A6NKT7 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.7□□□□□ -1.5
RGPD3A6NKT7 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.7□□□□□ -1.5
RGPD3A6NKT7 FAM27D1-201ENST00000612308 341 ntBASIC5.7□□□□□ -1.5
RGPD3A6NKT7 AC018816.2-201ENST00000621460 353 ntBASIC5.7□□□□□ -1.5
RGPD3A6NKT7 CR392039.5-201ENST00000623201 510 ntBASIC5.7□□□□□ -1.5
RGPD3A6NKT7 AC020978.9-201ENST00000624380 1141 ntBASIC5.7□□□□□ -1.5
RGPD3A6NKT7 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RGPD3A6NKT7 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RGPD3A6NKT7 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.69□□□□□ -1.5
RGPD3A6NKT7 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
RGPD3A6NKT7 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RGPD3A6NKT7 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RGPD3A6NKT7 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RGPD3A6NKT7 AL391684.1-202ENST00000641293 1636 ntBASIC5.69□□□□□ -1.5
RGPD3A6NKT7 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RGPD3A6NKT7 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.69□□□□□ -1.5
RGPD3A6NKT7 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.69□□□□□ -1.5
RGPD3A6NKT7 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
RGPD3A6NKT7 ENSAP1-201ENST00000392855 326 ntBASIC5.69□□□□□ -1.5
RGPD3A6NKT7 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.69□□□□□ -1.5
RGPD3A6NKT7 RGS17P1-201ENST00000423358 553 ntBASIC5.69□□□□□ -1.5
RGPD3A6NKT7 AC114495.1-201ENST00000441274 436 ntBASIC5.69□□□□□ -1.5
RGPD3A6NKT7 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.69□□□□□ -1.5
RGPD3A6NKT7 AL500522.2-201ENST00000448562 343 ntBASIC5.69□□□□□ -1.5
RGPD3A6NKT7 DYNLL1P4-201ENST00000549314 266 ntBASIC5.69□□□□□ -1.5
RGPD3A6NKT7 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.69□□□□□ -1.5
RGPD3A6NKT7 AL357559.1-201ENST00000622228 274 ntBASIC5.69□□□□□ -1.5
RGPD3A6NKT7 AC005858.4-201ENST00000623191 700 ntBASIC5.69□□□□□ -1.5
RGPD3A6NKT7 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
RGPD3A6NKT7 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
RGPD3A6NKT7 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
RGPD3A6NKT7 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
RGPD3A6NKT7 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RGPD3A6NKT7 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RGPD3A6NKT7 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
RGPD3A6NKT7 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RGPD3A6NKT7 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
RGPD3A6NKT7 COX6B1P7-201ENST00000430845 235 ntBASIC5.68□□□□□ -1.5
RGPD3A6NKT7 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.68□□□□□ -1.5
RGPD3A6NKT7 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.68□□□□□ -1.5
RGPD3A6NKT7 RPL5P12-201ENST00000477071 851 ntBASIC5.68□□□□□ -1.5
RGPD3A6NKT7 AL592156.1-201ENST00000508758 304 ntBASIC5.68□□□□□ -1.5
RGPD3A6NKT7 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.68□□□□□ -1.5
RGPD3A6NKT7 AC093014.1-201ENST00000548926 724 ntBASIC5.68□□□□□ -1.5
RGPD3A6NKT7 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC5.68□□□□□ -1.5
RGPD3A6NKT7 AC087499.8-201ENST00000578406 226 ntBASIC5.68□□□□□ -1.5
RGPD3A6NKT7 AL161729.3-201ENST00000603533 673 ntBASIC5.68□□□□□ -1.5
RGPD3A6NKT7 AC112230.1-201ENST00000604342 547 ntBASIC5.68□□□□□ -1.5
RGPD3A6NKT7 AL354984.3-201ENST00000604803 325 ntBASIC5.68□□□□□ -1.5
RGPD3A6NKT7 AL121772.2-201ENST00000614331 297 ntBASIC5.68□□□□□ -1.5
RGPD3A6NKT7 AC233968.1-201ENST00000611212 1300 ntBASIC5.68□□□□□ -1.5
RGPD3A6NKT7 AL929601.4-201ENST00000613011 1341 ntBASIC5.68□□□□□ -1.5
RGPD3A6NKT7 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.68□□□□□ -1.5
RGPD3A6NKT7 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RGPD3A6NKT7 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RGPD3A6NKT7 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.68□□□□□ -1.5
RGPD3A6NKT7 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RGPD3A6NKT7 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RGPD3A6NKT7 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
RGPD3A6NKT7 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC5.68□□□□□ -1.5
RGPD3A6NKT7 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.68□□□□□ -1.5
RGPD3A6NKT7 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.67□□□□□ -1.5
RGPD3A6NKT7 AL157831.1-201ENST00000426134 473 ntBASIC5.67□□□□□ -1.5
RGPD3A6NKT7 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RGPD3A6NKT7 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.67□□□□□ -1.5
RGPD3A6NKT7 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.67□□□□□ -1.5
RGPD3A6NKT7 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.67□□□□□ -1.5
RGPD3A6NKT7 AC012468.1-201ENST00000604888 430 ntBASIC5.67□□□□□ -1.5
RGPD3A6NKT7 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC5.67□□□□□ -1.5
RGPD3A6NKT7 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RGPD3A6NKT7 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
RGPD3A6NKT7 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC5.67□□□□□ -1.5
RGPD3A6NKT7 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC5.67□□□□□ -1.5
RGPD3A6NKT7 EIF3EP2-201ENST00000423042 1814 ntBASIC5.67□□□□□ -1.5
RGPD3A6NKT7 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RGPD3A6NKT7 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
RGPD3A6NKT7 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.67□□□□□ -1.5
RGPD3A6NKT7 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RGPD3A6NKT7 AC233289.1-201ENST00000403700 508 ntBASIC5.67□□□□□ -1.5
RGPD3A6NKT7 CYCSP10-201ENST00000417973 294 ntBASIC5.67□□□□□ -1.5
RGPD3A6NKT7 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.67□□□□□ -1.5
RGPD3A6NKT7 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC5.67□□□□□ -1.5
RGPD3A6NKT7 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.67□□□□□ -1.5
RGPD3A6NKT7 AC099522.1-202ENST00000514718 367 ntBASIC5.67□□□□□ -1.5
RGPD3A6NKT7 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.67□□□□□ -1.5
RGPD3A6NKT7 GTF2IP22-201ENST00000554443 182 ntBASIC5.67□□□□□ -1.5
RGPD3A6NKT7 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.67□□□□□ -1.5
RGPD3A6NKT7 AC019176.2-201ENST00000611579 315 ntBASIC5.67□□□□□ -1.5
RGPD3A6NKT7 TEX41-300ENST00000631048 69 ntTSL 5 BASIC5.67□□□□□ -1.5
RGPD3A6NKT7 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RGPD3A6NKT7 AL049781.1-201ENST00000623195 3585 ntBASIC5.67□□□□□ -1.5
RGPD3A6NKT7 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RGPD3A6NKT7 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RGPD3A6NKT7 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
RGPD3A6NKT7 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RGPD3A6NKT7 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms