Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC78A2IDD5 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC78A2IDD5 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC78A2IDD5 MTCO1P18-201ENST00000455518 1419 ntBASIC5.63□□□□□ -1.51
CCDC78A2IDD5 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
CCDC78A2IDD5 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC78A2IDD5 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CCDC78A2IDD5 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC78A2IDD5 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC78A2IDD5 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC78A2IDD5 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC78A2IDD5 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC78A2IDD5 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC78A2IDD5 OR4F13P-202ENST00000560066 2054 ntBASIC5.62□□□□□ -1.51
CCDC78A2IDD5 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC78A2IDD5 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CCDC78A2IDD5 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CCDC78A2IDD5 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC78A2IDD5 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC78A2IDD5 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC78A2IDD5 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC78A2IDD5 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC78A2IDD5 RNU4-31P-201ENST00000384211 141 ntBASIC5.62□□□□□ -1.51
CCDC78A2IDD5 Y_RNA.505-201ENST00000384489 102 ntBASIC5.62□□□□□ -1.51
CCDC78A2IDD5 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC78A2IDD5 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC78A2IDD5 USP9YP26-201ENST00000421008 661 ntBASIC5.62□□□□□ -1.51
CCDC78A2IDD5 GTF2IP2-201ENST00000424290 697 ntBASIC5.62□□□□□ -1.51
CCDC78A2IDD5 AL662874.1-201ENST00000426065 230 ntBASIC5.62□□□□□ -1.51
CCDC78A2IDD5 RPS4XP16-201ENST00000427198 791 ntBASIC5.62□□□□□ -1.51
CCDC78A2IDD5 RPS27AP6-201ENST00000427962 448 ntBASIC5.62□□□□□ -1.51
CCDC78A2IDD5 AL022331.1-201ENST00000429025 477 ntBASIC5.62□□□□□ -1.51
CCDC78A2IDD5 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC78A2IDD5 AC090018.1-201ENST00000434369 367 ntBASIC5.62□□□□□ -1.51
CCDC78A2IDD5 GSTA7P-201ENST00000438425 448 ntBASIC5.62□□□□□ -1.51
CCDC78A2IDD5 CACYBPP1-201ENST00000438592 684 ntBASIC5.62□□□□□ -1.51
CCDC78A2IDD5 MTCYBP42-201ENST00000444653 1130 ntBASIC5.62□□□□□ -1.51
CCDC78A2IDD5 AL161636.2-201ENST00000445179 927 ntBASIC5.62□□□□□ -1.51
CCDC78A2IDD5 RPL36AP39-201ENST00000445859 318 ntBASIC5.62□□□□□ -1.51
CCDC78A2IDD5 AL050341.1-201ENST00000447743 313 ntBASIC5.62□□□□□ -1.51
CCDC78A2IDD5 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC78A2IDD5 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.62□□□□□ -1.51
CCDC78A2IDD5 AC090602.1-201ENST00000469695 252 ntBASIC5.62□□□□□ -1.51
CCDC78A2IDD5 RN7SL583P-201ENST00000475692 287 ntBASIC5.62□□□□□ -1.51
CCDC78A2IDD5 AC093890.1-201ENST00000502554 540 ntBASIC5.62□□□□□ -1.51
CCDC78A2IDD5 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC78A2IDD5 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC78A2IDD5 HPRT1P2-201ENST00000505250 544 ntBASIC5.62□□□□□ -1.51
CCDC78A2IDD5 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC78A2IDD5 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC78A2IDD5 AC074087.1-201ENST00000512059 724 ntBASIC5.62□□□□□ -1.51
CCDC78A2IDD5 SCARNA21.2-201ENST00000516600 166 ntBASIC5.62□□□□□ -1.51
CCDC78A2IDD5 SNORA31.13-201ENST00000516624 135 ntBASIC5.62□□□□□ -1.51
CCDC78A2IDD5 SNORA43.3-201ENST00000517240 103 ntBASIC5.62□□□□□ -1.51
CCDC78A2IDD5 TMEM97P2-201ENST00000517841 403 ntBASIC5.62□□□□□ -1.51
CCDC78A2IDD5 HIGD1AP18-201ENST00000520730 278 ntBASIC5.62□□□□□ -1.51
CCDC78A2IDD5 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC78A2IDD5 AC018442.3-201ENST00000523025 183 ntBASIC5.62□□□□□ -1.51
CCDC78A2IDD5 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC78A2IDD5 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC78A2IDD5 AC122688.1-201ENST00000541494 223 ntBASIC5.62□□□□□ -1.51
CCDC78A2IDD5 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC78A2IDD5 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC78A2IDD5 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC78A2IDD5 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CCDC78A2IDD5 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC78A2IDD5 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC78A2IDD5 AL445423.1-201ENST00000609941 536 ntBASIC5.62□□□□□ -1.51
CCDC78A2IDD5 AC114786.1-201ENST00000512892 1415 ntBASIC5.62□□□□□ -1.51
CCDC78A2IDD5 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC78A2IDD5 AC019072.1-201ENST00000604535 1551 ntBASIC5.62□□□□□ -1.51
CCDC78A2IDD5 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC78A2IDD5 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC78A2IDD5 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC78A2IDD5 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC78A2IDD5 AC009962.1-201ENST00000567327 3813 ntBASIC5.62□□□□□ -1.51
CCDC78A2IDD5 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC78A2IDD5 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC78A2IDD5 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
CCDC78A2IDD5 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
CCDC78A2IDD5 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CCDC78A2IDD5 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC78A2IDD5 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC78A2IDD5 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
CCDC78A2IDD5 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
CCDC78A2IDD5 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC78A2IDD5 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC78A2IDD5 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CCDC78A2IDD5 RN7SKP149-201ENST00000363008 344 ntBASIC5.61□□□□□ -1.51
CCDC78A2IDD5 Y_RNA.472-201ENST00000384322 102 ntBASIC5.61□□□□□ -1.51
CCDC78A2IDD5 RNU6-549P-201ENST00000384433 107 ntBASIC5.61□□□□□ -1.51
CCDC78A2IDD5 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CCDC78A2IDD5 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CCDC78A2IDD5 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC78A2IDD5 Z75741.2-201ENST00000417272 1167 ntBASIC5.61□□□□□ -1.51
CCDC78A2IDD5 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC78A2IDD5 OR6K4P-201ENST00000423179 955 ntBASIC5.61□□□□□ -1.51
CCDC78A2IDD5 RPF2P1-201ENST00000424137 906 ntBASIC5.61□□□□□ -1.51
CCDC78A2IDD5 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC78A2IDD5 NANOGP2-201ENST00000435391 727 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms