Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 IL6STP1-201ENST00000346911 1020 ntBASIC4.36□□□□□ -1.71
VPS29Q9UBQ0 RNA5SP151-201ENST00000365632 117 ntBASIC4.36□□□□□ -1.71
VPS29Q9UBQ0 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
VPS29Q9UBQ0 RN7SKP278-201ENST00000410504 342 ntBASIC4.36□□□□□ -1.71
VPS29Q9UBQ0 RPS26P13-201ENST00000419030 330 ntBASIC4.36□□□□□ -1.71
VPS29Q9UBQ0 PA2G4P6-201ENST00000438325 1197 ntBASIC4.36□□□□□ -1.71
VPS29Q9UBQ0 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.36□□□□□ -1.71
VPS29Q9UBQ0 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.36□□□□□ -1.71
VPS29Q9UBQ0 RPL7L1P1-201ENST00000448259 785 ntBASIC4.36□□□□□ -1.71
VPS29Q9UBQ0 RPL7P61-201ENST00000451721 751 ntBASIC4.36□□□□□ -1.71
VPS29Q9UBQ0 RPS6P2-201ENST00000454208 705 ntBASIC4.36□□□□□ -1.71
VPS29Q9UBQ0 AC012158.1-204ENST00000483430 465 ntBASIC4.36□□□□□ -1.71
VPS29Q9UBQ0 MTND4LP2-201ENST00000502312 285 ntBASIC4.36□□□□□ -1.71
VPS29Q9UBQ0 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.36□□□□□ -1.71
VPS29Q9UBQ0 AC021146.3-201ENST00000511911 260 ntBASIC4.36□□□□□ -1.71
VPS29Q9UBQ0 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.36□□□□□ -1.71
VPS29Q9UBQ0 AC090151.1-201ENST00000520784 730 ntBASIC4.36□□□□□ -1.71
VPS29Q9UBQ0 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VPS29Q9UBQ0 MIR4675-201ENST00000577898 77 ntBASIC4.36□□□□□ -1.71
VPS29Q9UBQ0 SLC25A36P1-201ENST00000590111 465 ntBASIC4.36□□□□□ -1.71
VPS29Q9UBQ0 BPIFA4P-203ENST00000603168 689 ntBASIC4.36□□□□□ -1.71
VPS29Q9UBQ0 AL008729.2-201ENST00000606393 473 ntBASIC4.36□□□□□ -1.71
VPS29Q9UBQ0 uc_338.18-201ENST00000615451 175 ntBASIC4.36□□□□□ -1.71
VPS29Q9UBQ0 MIR6719-201ENST00000622428 87 ntBASIC4.36□□□□□ -1.71
VPS29Q9UBQ0 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.36□□□□□ -1.71
VPS29Q9UBQ0 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.36□□□□□ -1.71
VPS29Q9UBQ0 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.36□□□□□ -1.71
VPS29Q9UBQ0 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
VPS29Q9UBQ0 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VPS29Q9UBQ0 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
VPS29Q9UBQ0 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.36□□□□□ -1.71
VPS29Q9UBQ0 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.35□□□□□ -1.71
VPS29Q9UBQ0 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
VPS29Q9UBQ0 UGT2B26P-201ENST00000508672 1613 ntBASIC4.35□□□□□ -1.71
VPS29Q9UBQ0 AC125257.1-201ENST00000560400 2930 ntBASIC4.35□□□□□ -1.71
VPS29Q9UBQ0 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.35□□□□□ -1.71
VPS29Q9UBQ0 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
VPS29Q9UBQ0 NXPH1-205ENST00000602349 1953 ntBASIC4.35□□□□□ -1.71
VPS29Q9UBQ0 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.35□□□□□ -1.71
VPS29Q9UBQ0 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.35□□□□□ -1.71
VPS29Q9UBQ0 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VPS29Q9UBQ0 MIR298-201ENST00000401212 88 ntBASIC4.35□□□□□ -1.71
VPS29Q9UBQ0 OR1F12-201ENST00000402365 945 ntBASIC4.35□□□□□ -1.71
VPS29Q9UBQ0 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.35□□□□□ -1.71
VPS29Q9UBQ0 AC062016.2-201ENST00000420950 676 ntBASIC4.35□□□□□ -1.71
VPS29Q9UBQ0 RAD23BP1-201ENST00000421404 1227 ntBASIC4.35□□□□□ -1.71
VPS29Q9UBQ0 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS29Q9UBQ0 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS29Q9UBQ0 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VPS29Q9UBQ0 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS29Q9UBQ0 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
VPS29Q9UBQ0 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS29Q9UBQ0 HMGB1P19-201ENST00000517578 577 ntBASIC4.35□□□□□ -1.71
VPS29Q9UBQ0 IGKV1-32-201ENST00000519290 311 ntBASIC4.35□□□□□ -1.71
VPS29Q9UBQ0 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS29Q9UBQ0 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
VPS29Q9UBQ0 AC016180.1-201ENST00000567945 403 ntBASIC4.35□□□□□ -1.71
VPS29Q9UBQ0 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS29Q9UBQ0 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS29Q9UBQ0 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.35□□□□□ -1.71
VPS29Q9UBQ0 AC103792.1-201ENST00000603591 919 ntBASIC4.35□□□□□ -1.71
VPS29Q9UBQ0 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.35□□□□□ -1.71
VPS29Q9UBQ0 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.35□□□□□ -1.71
VPS29Q9UBQ0 AC013244.1-201ENST00000604279 193 ntBASIC4.35□□□□□ -1.71
VPS29Q9UBQ0 AL133338.2-201ENST00000604292 736 ntBASIC4.35□□□□□ -1.71
VPS29Q9UBQ0 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.35□□□□□ -1.71
VPS29Q9UBQ0 AL445528.2-201ENST00000620582 470 ntBASIC4.35□□□□□ -1.71
VPS29Q9UBQ0 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
VPS29Q9UBQ0 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.35□□□□□ -1.71
VPS29Q9UBQ0 CASC19-222ENST00000641321 1173 ntBASIC4.35□□□□□ -1.71
VPS29Q9UBQ0 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VPS29Q9UBQ0 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VPS29Q9UBQ0 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.35□□□□□ -1.71
VPS29Q9UBQ0 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.35□□□□□ -1.71
VPS29Q9UBQ0 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VPS29Q9UBQ0 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VPS29Q9UBQ0 AC021146.4-201ENST00000309229 279 ntBASIC4.34□□□□□ -1.71
VPS29Q9UBQ0 RNU1-63P-201ENST00000383902 164 ntBASIC4.34□□□□□ -1.71
VPS29Q9UBQ0 RPL21P108-201ENST00000413857 481 ntBASIC4.34□□□□□ -1.71
VPS29Q9UBQ0 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.34□□□□□ -1.71
VPS29Q9UBQ0 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.34□□□□□ -1.71
VPS29Q9UBQ0 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS29Q9UBQ0 AC092324.1-201ENST00000468671 324 ntBASIC4.34□□□□□ -1.71
VPS29Q9UBQ0 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS29Q9UBQ0 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS29Q9UBQ0 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.34□□□□□ -1.71
VPS29Q9UBQ0 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS29Q9UBQ0 AC008759.1-201ENST00000589783 983 ntBASIC4.34□□□□□ -1.71
VPS29Q9UBQ0 AP002360.3-201ENST00000607673 710 ntBASIC4.34□□□□□ -1.71
VPS29Q9UBQ0 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.34□□□□□ -1.71
VPS29Q9UBQ0 AC010928.1-201ENST00000592477 1447 ntBASIC4.34□□□□□ -1.71
VPS29Q9UBQ0 AC120338.1-201ENST00000625074 1541 ntBASIC4.34□□□□□ -1.71
VPS29Q9UBQ0 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.34□□□□□ -1.71
VPS29Q9UBQ0 LINC00622-201ENST00000562811 1570 ntBASIC4.34□□□□□ -1.71
VPS29Q9UBQ0 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
VPS29Q9UBQ0 AC139769.1-204ENST00000472297 1931 ntBASIC4.34□□□□□ -1.71
VPS29Q9UBQ0 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
VPS29Q9UBQ0 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
VPS29Q9UBQ0 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
VPS29Q9UBQ0 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms