Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SSU72Q9NP77 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SSU72Q9NP77 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SSU72Q9NP77 Y_RNA.402-201ENST00000383972 102 ntBASIC6.29□□□□□ -1.4
SSU72Q9NP77 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SSU72Q9NP77 OR51A3P-201ENST00000413596 924 ntBASIC6.29□□□□□ -1.4
SSU72Q9NP77 AL662791.3-201ENST00000413771 776 ntBASIC6.29□□□□□ -1.4
SSU72Q9NP77 AC114814.2-201ENST00000419195 485 ntBASIC6.29□□□□□ -1.4
SSU72Q9NP77 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC6.29□□□□□ -1.4
SSU72Q9NP77 LINC00993-201ENST00000420453 540 ntBASIC6.29□□□□□ -1.4
SSU72Q9NP77 MTCYBP45-201ENST00000435243 565 ntBASIC6.29□□□□□ -1.4
SSU72Q9NP77 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.29□□□□□ -1.4
SSU72Q9NP77 RPL39P6-201ENST00000448289 150 ntBASIC6.29□□□□□ -1.4
SSU72Q9NP77 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SSU72Q9NP77 BX248409.1-201ENST00000455497 255 ntBASIC6.29□□□□□ -1.4
SSU72Q9NP77 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SSU72Q9NP77 RN7SL91P-201ENST00000469313 291 ntBASIC6.29□□□□□ -1.4
SSU72Q9NP77 RN7SL223P-201ENST00000470401 294 ntBASIC6.29□□□□□ -1.4
SSU72Q9NP77 OR52A4P-201ENST00000472867 958 ntBASIC6.29□□□□□ -1.4
SSU72Q9NP77 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.29□□□□□ -1.4
SSU72Q9NP77 HMGN1P12-201ENST00000499125 195 ntBASIC6.29□□□□□ -1.4
SSU72Q9NP77 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC6.29□□□□□ -1.4
SSU72Q9NP77 AC138409.2-202ENST00000507274 458 ntBASIC6.29□□□□□ -1.4
SSU72Q9NP77 DUTP7-201ENST00000507982 486 ntBASIC6.29□□□□□ -1.4
SSU72Q9NP77 IGKV2D-38-201ENST00000518423 240 ntBASIC6.29□□□□□ -1.4
SSU72Q9NP77 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC6.29□□□□□ -1.4
SSU72Q9NP77 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SSU72Q9NP77 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.29□□□□□ -1.4
SSU72Q9NP77 AC023080.1-201ENST00000551663 931 ntBASIC6.29□□□□□ -1.4
SSU72Q9NP77 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC6.29□□□□□ -1.4
SSU72Q9NP77 AL157700.1-201ENST00000561973 1432 ntBASIC6.29□□□□□ -1.4
SSU72Q9NP77 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC6.29□□□□□ -1.4
SSU72Q9NP77 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC6.29□□□□□ -1.4
SSU72Q9NP77 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.29□□□□□ -1.4
SSU72Q9NP77 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SSU72Q9NP77 AC010487.1-201ENST00000594408 1172 ntBASIC6.29□□□□□ -1.4
SSU72Q9NP77 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SSU72Q9NP77 AL139286.1-201ENST00000604465 483 ntBASIC6.29□□□□□ -1.4
SSU72Q9NP77 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC6.29□□□□□ -1.4
SSU72Q9NP77 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC6.29□□□□□ -1.4
SSU72Q9NP77 AL592295.2-201ENST00000612578 206 ntBASIC6.29□□□□□ -1.4
SSU72Q9NP77 AL031658.2-201ENST00000616850 651 ntBASIC6.29□□□□□ -1.4
SSU72Q9NP77 MIR6085-201ENST00000618314 110 ntBASIC6.29□□□□□ -1.4
SSU72Q9NP77 AC112204.3-201ENST00000623822 332 ntBASIC6.29□□□□□ -1.4
SSU72Q9NP77 AC112255.1-201ENST00000624070 2493 ntBASIC6.29□□□□□ -1.4
SSU72Q9NP77 MAPK10-270ENST00000641102 3538 ntBASIC6.29□□□□□ -1.4
SSU72Q9NP77 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.29□□□□□ -1.4
SSU72Q9NP77 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.29□□□□□ -1.4
SSU72Q9NP77 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.29□□□□□ -1.4
SSU72Q9NP77 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SSU72Q9NP77 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SSU72Q9NP77 AC022164.1-201ENST00000568767 2673 ntBASIC6.29□□□□□ -1.4
SSU72Q9NP77 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.29□□□□□ -1.4
SSU72Q9NP77 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SSU72Q9NP77 AP001541.1-201ENST00000623322 1904 ntBASIC6.29□□□□□ -1.4
SSU72Q9NP77 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SSU72Q9NP77 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.28□□□□□ -1.4
SSU72Q9NP77 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.28□□□□□ -1.4
SSU72Q9NP77 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.28□□□□□ -1.4
SSU72Q9NP77 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.28□□□□□ -1.4
SSU72Q9NP77 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.28□□□□□ -1.4
SSU72Q9NP77 AC022306.1-201ENST00000560489 1562 ntBASIC6.28□□□□□ -1.4
SSU72Q9NP77 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SSU72Q9NP77 NAMPTP1-201ENST00000440465 2514 ntBASIC6.28□□□□□ -1.4
SSU72Q9NP77 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSU72Q9NP77 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
SSU72Q9NP77 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
SSU72Q9NP77 PPIAP24-201ENST00000328558 471 ntBASIC6.28□□□□□ -1.4
SSU72Q9NP77 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSU72Q9NP77 SNORD16-201ENST00000362803 99 ntBASIC6.28□□□□□ -1.4
SSU72Q9NP77 Y_RNA.97-201ENST00000363094 102 ntBASIC6.28□□□□□ -1.4
SSU72Q9NP77 RNU6-534P-201ENST00000364877 106 ntBASIC6.28□□□□□ -1.4
SSU72Q9NP77 RNA5SP152-201ENST00000365184 110 ntBASIC6.28□□□□□ -1.4
SSU72Q9NP77 AL512422.1-201ENST00000407033 553 ntBASIC6.28□□□□□ -1.4
SSU72Q9NP77 RN7SKP91-201ENST00000410852 288 ntBASIC6.28□□□□□ -1.4
SSU72Q9NP77 RN7SKP17-201ENST00000411242 351 ntBASIC6.28□□□□□ -1.4
SSU72Q9NP77 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC6.28□□□□□ -1.4
SSU72Q9NP77 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC6.28□□□□□ -1.4
SSU72Q9NP77 AL359633.1-201ENST00000421403 310 ntBASIC6.28□□□□□ -1.4
SSU72Q9NP77 AL356583.2-201ENST00000426536 280 ntBASIC6.28□□□□□ -1.4
SSU72Q9NP77 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC6.28□□□□□ -1.4
SSU72Q9NP77 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.28□□□□□ -1.4
SSU72Q9NP77 AL731534.1-201ENST00000434711 269 ntBASIC6.28□□□□□ -1.4
SSU72Q9NP77 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC6.28□□□□□ -1.4
SSU72Q9NP77 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC6.28□□□□□ -1.4
SSU72Q9NP77 PCBP2P1-201ENST00000437262 977 ntBASIC6.28□□□□□ -1.4
SSU72Q9NP77 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.28□□□□□ -1.4
SSU72Q9NP77 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.28□□□□□ -1.4
SSU72Q9NP77 KRT8P51-201ENST00000438938 274 ntBASIC6.28□□□□□ -1.4
SSU72Q9NP77 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.28□□□□□ -1.4
SSU72Q9NP77 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.28□□□□□ -1.4
SSU72Q9NP77 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC6.28□□□□□ -1.4
SSU72Q9NP77 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.28□□□□□ -1.4
SSU72Q9NP77 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC6.28□□□□□ -1.4
SSU72Q9NP77 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC6.28□□□□□ -1.4
SSU72Q9NP77 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.28□□□□□ -1.4
SSU72Q9NP77 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.28□□□□□ -1.4
SSU72Q9NP77 OR9A1P-202ENST00000484361 945 ntBASIC6.28□□□□□ -1.4
SSU72Q9NP77 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.28□□□□□ -1.4
SSU72Q9NP77 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms