Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AL589647.1-201ENST00000402485 466 ntBASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 HYKK-202ENST00000408962 847 ntTSL 5 BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 AC009237.2-201ENST00000421358 284 ntBASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 VN1R20P-201ENST00000425215 966 ntBASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 POU5F1P5-201ENST00000445059 658 ntBASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 RPL23AP15-201ENST00000450202 459 ntBASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 RPL23AP35-201ENST00000451906 501 ntBASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 VN1R32P-201ENST00000452234 905 ntBASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 VPS25P1-201ENST00000455691 508 ntBASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 AC072039.1-201ENST00000477611 581 ntBASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 AL024509.2-201ENST00000493462 493 ntBASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 RPL7L1P13-201ENST00000511702 739 ntBASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 RNA5SP441-201ENST00000516809 88 ntBASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 COX6B1P4-201ENST00000519826 484 ntBASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 AC027309.2-201ENST00000520566 192 ntBASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 AC106038.2-201ENST00000520706 568 ntBASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 AC006512.2-201ENST00000543250 486 ntBASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 AC026956.1-201ENST00000558741 396 ntBASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 HYKK-203ENST00000563233 734 ntTSL 2 BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 AC119751.7-201ENST00000600494 245 ntBASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 AC114477.1-201ENST00000605097 605 ntBASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 uc_338.31-201ENST00000615595 186 ntBASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 AC127502.3-201ENST00000636170 1206 ntBASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 AC000095.2-202ENST00000637415 154 ntBASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM55Q9BYV6 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.22□□□□□ -1.41
TRIM55Q9BYV6 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.22□□□□□ -1.41
TRIM55Q9BYV6 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM55Q9BYV6 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.22□□□□□ -1.41
TRIM55Q9BYV6 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM55Q9BYV6 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.22□□□□□ -1.41
TRIM55Q9BYV6 AC020633.1-201ENST00000468439 2247 ntBASIC6.22□□□□□ -1.41
TRIM55Q9BYV6 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
TRIM55Q9BYV6 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
TRIM55Q9BYV6 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
TRIM55Q9BYV6 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
TRIM55Q9BYV6 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
TRIM55Q9BYV6 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
TRIM55Q9BYV6 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.22□□□□□ -1.41
TRIM55Q9BYV6 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
TRIM55Q9BYV6 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM55Q9BYV6 AC016716.1-201ENST00000265882 708 ntBASIC6.22□□□□□ -1.41
TRIM55Q9BYV6 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM55Q9BYV6 RNA5SP485-201ENST00000365053 119 ntBASIC6.22□□□□□ -1.41
TRIM55Q9BYV6 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.22□□□□□ -1.41
TRIM55Q9BYV6 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM55Q9BYV6 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
TRIM55Q9BYV6 GAPDHP42-201ENST00000406848 981 ntBASIC6.22□□□□□ -1.41
TRIM55Q9BYV6 MIR1284-201ENST00000408337 120 ntBASIC6.22□□□□□ -1.41
TRIM55Q9BYV6 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.22□□□□□ -1.41
TRIM55Q9BYV6 MRPS21P2-201ENST00000424704 264 ntBASIC6.22□□□□□ -1.41
TRIM55Q9BYV6 DLGAP5P1-201ENST00000430307 464 ntBASIC6.22□□□□□ -1.41
TRIM55Q9BYV6 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.22□□□□□ -1.41
TRIM55Q9BYV6 CCNB1IP1P2-201ENST00000432876 818 ntBASIC6.22□□□□□ -1.41
TRIM55Q9BYV6 KCTD10P1-201ENST00000434203 625 ntBASIC6.22□□□□□ -1.41
TRIM55Q9BYV6 HMGN1P2-201ENST00000445197 310 ntBASIC6.22□□□□□ -1.41
TRIM55Q9BYV6 UBBP5-201ENST00000446970 266 ntBASIC6.22□□□□□ -1.41
TRIM55Q9BYV6 OR6C5P-201ENST00000452388 923 ntBASIC6.22□□□□□ -1.41
TRIM55Q9BYV6 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.22□□□□□ -1.41
TRIM55Q9BYV6 RN7SL362P-201ENST00000494228 267 ntBASIC6.22□□□□□ -1.41
TRIM55Q9BYV6 ARL4AP1-201ENST00000503220 705 ntBASIC6.22□□□□□ -1.41
TRIM55Q9BYV6 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM55Q9BYV6 MTND4P2-201ENST00000507767 1203 ntBASIC6.22□□□□□ -1.41
TRIM55Q9BYV6 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.22□□□□□ -1.41
TRIM55Q9BYV6 MTND3P5-201ENST00000512798 333 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms