Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.71□□□□□ -1.82
GAFA1Q96PS6 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC3.7□□□□□ -1.82
GAFA1Q96PS6 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
GAFA1Q96PS6 AC092435.4-201ENST00000623012 4159 ntBASIC3.7□□□□□ -1.82
GAFA1Q96PS6 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
GAFA1Q96PS6 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.7□□□□□ -1.82
GAFA1Q96PS6 RNU1-44P-201ENST00000384453 163 ntBASIC3.7□□□□□ -1.82
GAFA1Q96PS6 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
GAFA1Q96PS6 RPS20P14-201ENST00000412545 360 ntBASIC3.7□□□□□ -1.82
GAFA1Q96PS6 TMSB10P2-201ENST00000416049 131 ntBASIC3.7□□□□□ -1.82
GAFA1Q96PS6 AC012519.1-201ENST00000424588 610 ntBASIC3.7□□□□□ -1.82
GAFA1Q96PS6 CNOT7P1-201ENST00000429006 852 ntBASIC3.7□□□□□ -1.82
GAFA1Q96PS6 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.7□□□□□ -1.82
GAFA1Q96PS6 UBE2V1P3-201ENST00000439651 417 ntBASIC3.7□□□□□ -1.82
GAFA1Q96PS6 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
GAFA1Q96PS6 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.7□□□□□ -1.82
GAFA1Q96PS6 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC3.7□□□□□ -1.82
GAFA1Q96PS6 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC3.7□□□□□ -1.82
GAFA1Q96PS6 AC053481.1-201ENST00000467217 306 ntBASIC3.7□□□□□ -1.82
GAFA1Q96PS6 AC092905.1-201ENST00000467527 949 ntBASIC3.7□□□□□ -1.82
GAFA1Q96PS6 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC3.7□□□□□ -1.82
GAFA1Q96PS6 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC3.7□□□□□ -1.82
GAFA1Q96PS6 AC090013.1-201ENST00000485147 480 ntBASIC3.7□□□□□ -1.82
GAFA1Q96PS6 BTG4P1-201ENST00000510421 183 ntBASIC3.7□□□□□ -1.82
GAFA1Q96PS6 RNA5SP228-201ENST00000516232 133 ntBASIC3.7□□□□□ -1.82
GAFA1Q96PS6 IGLVIV-65-201ENST00000517313 360 ntBASIC3.7□□□□□ -1.82
GAFA1Q96PS6 IGHVIII-2-1-201ENST00000518843 291 ntBASIC3.7□□□□□ -1.82
GAFA1Q96PS6 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC3.7□□□□□ -1.82
GAFA1Q96PS6 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.7□□□□□ -1.82
GAFA1Q96PS6 MEG8-217ENST00000556637 924 ntTSL 5 BASIC3.7□□□□□ -1.82
GAFA1Q96PS6 AC093591.2-201ENST00000565254 3843 ntBASIC3.7□□□□□ -1.82
GAFA1Q96PS6 MIR4700-201ENST00000578311 74 ntBASIC3.7□□□□□ -1.82
GAFA1Q96PS6 AL160290.3-201ENST00000604869 165 ntBASIC3.7□□□□□ -1.82
GAFA1Q96PS6 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.7□□□□□ -1.82
GAFA1Q96PS6 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3.7□□□□□ -1.82
GAFA1Q96PS6 TCP1P3-201ENST00000414406 1498 ntBASIC3.7□□□□□ -1.82
GAFA1Q96PS6 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC3.7□□□□□ -1.82
GAFA1Q96PS6 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.7□□□□□ -1.82
GAFA1Q96PS6 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
GAFA1Q96PS6 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
GAFA1Q96PS6 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
GAFA1Q96PS6 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC3.7□□□□□ -1.82
GAFA1Q96PS6 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
GAFA1Q96PS6 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC3.7□□□□□ -1.82
GAFA1Q96PS6 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC3.69□□□□□ -1.82
GAFA1Q96PS6 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
GAFA1Q96PS6 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
GAFA1Q96PS6 PCAT14-202ENST00000627127 3935 ntBASIC3.69□□□□□ -1.82
GAFA1Q96PS6 LINC01355-201ENST00000566551 5444 ntBASIC3.69□□□□□ -1.82
GAFA1Q96PS6 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.69□□□□□ -1.82
GAFA1Q96PS6 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC3.69□□□□□ -1.82
GAFA1Q96PS6 AC005261.6-201ENST00000623072 1387 ntBASIC3.69□□□□□ -1.82
GAFA1Q96PS6 RNA5SP307-201ENST00000362863 116 ntBASIC3.69□□□□□ -1.82
GAFA1Q96PS6 RNU1-20P-201ENST00000363314 162 ntBASIC3.69□□□□□ -1.82
GAFA1Q96PS6 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.69□□□□□ -1.82
GAFA1Q96PS6 RPL23AP59-201ENST00000399415 461 ntBASIC3.69□□□□□ -1.82
GAFA1Q96PS6 RN7SKP167-201ENST00000411047 285 ntBASIC3.69□□□□□ -1.82
GAFA1Q96PS6 SNORA74C-2-201ENST00000411179 201 ntBASIC3.69□□□□□ -1.82
GAFA1Q96PS6 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.69□□□□□ -1.82
GAFA1Q96PS6 SEPT7P8-201ENST00000413308 775 ntBASIC3.69□□□□□ -1.82
GAFA1Q96PS6 CEACAMP8-201ENST00000413902 580 ntBASIC3.69□□□□□ -1.82
GAFA1Q96PS6 AL356387.2-201ENST00000422272 243 ntBASIC3.69□□□□□ -1.82
GAFA1Q96PS6 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC3.69□□□□□ -1.82
GAFA1Q96PS6 RPL12P28-201ENST00000430852 489 ntBASIC3.69□□□□□ -1.82
GAFA1Q96PS6 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC3.69□□□□□ -1.82
GAFA1Q96PS6 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.69□□□□□ -1.82
GAFA1Q96PS6 CEACAMP9-201ENST00000442990 513 ntBASIC3.69□□□□□ -1.82
GAFA1Q96PS6 TXNP2-201ENST00000443918 295 ntBASIC3.69□□□□□ -1.82
GAFA1Q96PS6 RPS27AP15-201ENST00000447672 466 ntBASIC3.69□□□□□ -1.82
GAFA1Q96PS6 DHFRP3-201ENST00000455595 559 ntBASIC3.69□□□□□ -1.82
GAFA1Q96PS6 EIF4A2P4-201ENST00000458691 1196 ntBASIC3.69□□□□□ -1.82
GAFA1Q96PS6 snoU13.1-201ENST00000459157 104 ntBASIC3.69□□□□□ -1.82
GAFA1Q96PS6 RN7SL459P-201ENST00000481078 302 ntBASIC3.69□□□□□ -1.82
GAFA1Q96PS6 AC012123.2-201ENST00000485809 248 ntBASIC3.69□□□□□ -1.82
GAFA1Q96PS6 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.69□□□□□ -1.82
GAFA1Q96PS6 NPM1P21-201ENST00000513394 762 ntBASIC3.69□□□□□ -1.82
GAFA1Q96PS6 AC015795.1-201ENST00000513669 327 ntBASIC3.69□□□□□ -1.82
GAFA1Q96PS6 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.69□□□□□ -1.82
GAFA1Q96PS6 AC090151.1-201ENST00000520784 730 ntBASIC3.69□□□□□ -1.82
GAFA1Q96PS6 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
GAFA1Q96PS6 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
GAFA1Q96PS6 Z98200.1-201ENST00000607298 470 ntBASIC3.69□□□□□ -1.82
GAFA1Q96PS6 AL353726.1-201ENST00000614041 1000 ntBASIC3.69□□□□□ -1.82
GAFA1Q96PS6 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.69□□□□□ -1.82
GAFA1Q96PS6 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC3.69□□□□□ -1.82
GAFA1Q96PS6 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
GAFA1Q96PS6 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
GAFA1Q96PS6 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC3.69□□□□□ -1.82
GAFA1Q96PS6 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC3.69□□□□□ -1.82
GAFA1Q96PS6 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.69□□□□□ -1.82
GAFA1Q96PS6 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.68□□□□□ -1.82
GAFA1Q96PS6 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC3.68□□□□□ -1.82
GAFA1Q96PS6 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
GAFA1Q96PS6 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
GAFA1Q96PS6 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
GAFA1Q96PS6 AC008033.1-201ENST00000216407 1162 ntBASIC3.68□□□□□ -1.82
GAFA1Q96PS6 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
GAFA1Q96PS6 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
GAFA1Q96PS6 MIR3065-201ENST00000390137 79 ntBASIC3.68□□□□□ -1.82
GAFA1Q96PS6 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms