Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 NSRP1P1-201ENST00000444067 1693 ntBASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 SNORD116.1-201ENST00000365628 92 ntBASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 RNU6-83P-201ENST00000384568 112 ntBASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 U3.28-201ENST00000391249 210 ntBASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 AL079342.2-201ENST00000403367 482 ntBASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 AL136131.1-201ENST00000406079 803 ntBASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 MORF4L1P6-201ENST00000418771 268 ntBASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 CNOT7P1-201ENST00000429006 852 ntBASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 RPL7P29-201ENST00000437151 728 ntBASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 HMGB1P48-201ENST00000446155 598 ntBASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 MTND1P29-201ENST00000448112 647 ntBASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 AC234781.3-201ENST00000452540 973 ntBASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 NECAP1P2-201ENST00000455668 727 ntBASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 ANKRD26P4-201ENST00000455755 950 ntBASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 AC090602.1-201ENST00000469695 252 ntBASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 AC126121.1-201ENST00000482313 553 ntBASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 AL136038.1-201ENST00000497246 351 ntBASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 RPF2P2-201ENST00000504693 896 ntBASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 AC118282.2-201ENST00000508739 374 ntBASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 AC011411.1-201ENST00000509592 876 ntBASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 AC109464.1-201ENST00000511091 819 ntBASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 C1GALT1P3-201ENST00000522049 819 ntBASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 AC090819.1-201ENST00000523800 1111 ntBASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 POLR2KP1-201ENST00000553226 168 ntBASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 AC015720.2-201ENST00000567709 334 ntBASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 MTCO1P40-201ENST00000574371 625 ntBASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 MIR5708-201ENST00000579723 85 ntBASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 AC015726.1-201ENST00000602353 681 ntBASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 AC099676.1-201ENST00000608886 657 ntBASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 AP000255.1-201ENST00000610276 676 ntBASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 MIR6133-201ENST00000617057 108 ntBASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 AL356274.1-201ENST00000617064 410 ntBASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 AC132068.1-201ENST00000623805 459 ntBASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 DDX18P5-201ENST00000534547 1306 ntBASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 AC144833.1-201ENST00000567953 4089 ntBASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 AC006484.1-201ENST00000435086 1884 ntBASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 AC006042.3-201ENST00000454684 1469 ntBASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CTHRC1Q96CG8 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 AL137100.1-201ENST00000556703 1620 ntBASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 AC007996.1-201ENST00000620414 2821 ntBASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 AC138393.1-206ENST00000540997 1886 ntBASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 MIR320B1-201ENST00000390209 79 ntBASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 U3.25-201ENST00000391209 220 ntBASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 RAP1BP1-201ENST00000412709 553 ntBASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 MTND4P20-201ENST00000424125 869 ntBASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 OR5AW1P-201ENST00000426334 1006 ntBASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 AC234064.1-201ENST00000436312 247 ntBASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 MTND4P32-201ENST00000437189 1237 ntBASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 COX7BP2-201ENST00000437976 242 ntBASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 ARAFP2-201ENST00000440565 559 ntBASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 AL035090.1-201ENST00000454835 332 ntBASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 RANP1-206ENST00000455094 651 ntBASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 RPL35AP19-201ENST00000469425 329 ntBASIC5.12□□□□□ -1.59
CTHRC1Q96CG8 RPL7P40-201ENST00000481703 745 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms