Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.33□□□□□ -1.56
HMGB4Q8WW32 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HMGB4Q8WW32 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HMGB4Q8WW32 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
HMGB4Q8WW32 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
HMGB4Q8WW32 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
HMGB4Q8WW32 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HMGB4Q8WW32 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HMGB4Q8WW32 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.33□□□□□ -1.56
HMGB4Q8WW32 AC016745.2-201ENST00000608834 3443 ntBASIC5.33□□□□□ -1.56
HMGB4Q8WW32 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.33□□□□□ -1.56
HMGB4Q8WW32 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
HMGB4Q8WW32 RNU6-543P-201ENST00000362576 108 ntBASIC5.33□□□□□ -1.56
HMGB4Q8WW32 RNU6-236P-201ENST00000363886 106 ntBASIC5.33□□□□□ -1.56
HMGB4Q8WW32 DNAJC19P6-201ENST00000401853 280 ntBASIC5.33□□□□□ -1.56
HMGB4Q8WW32 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.33□□□□□ -1.56
HMGB4Q8WW32 AL360081.1-201ENST00000428299 555 ntBASIC5.33□□□□□ -1.56
HMGB4Q8WW32 FTH1P16-201ENST00000435241 552 ntBASIC5.33□□□□□ -1.56
HMGB4Q8WW32 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HMGB4Q8WW32 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.33□□□□□ -1.56
HMGB4Q8WW32 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.33□□□□□ -1.56
HMGB4Q8WW32 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.33□□□□□ -1.56
HMGB4Q8WW32 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.33□□□□□ -1.56
HMGB4Q8WW32 RPL6P9-201ENST00000466502 859 ntBASIC5.33□□□□□ -1.56
HMGB4Q8WW32 RN7SL188P-201ENST00000469842 285 ntBASIC5.33□□□□□ -1.56
HMGB4Q8WW32 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.33□□□□□ -1.56
HMGB4Q8WW32 AC058823.1-201ENST00000485315 474 ntBASIC5.33□□□□□ -1.56
HMGB4Q8WW32 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.33□□□□□ -1.56
HMGB4Q8WW32 AC093890.1-201ENST00000502554 540 ntBASIC5.33□□□□□ -1.56
HMGB4Q8WW32 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.33□□□□□ -1.56
HMGB4Q8WW32 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.33□□□□□ -1.56
HMGB4Q8WW32 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
HMGB4Q8WW32 AC093752.1-206ENST00000511823 336 ntBASIC5.33□□□□□ -1.56
HMGB4Q8WW32 GAPDHP62-201ENST00000515313 990 ntBASIC5.33□□□□□ -1.56
HMGB4Q8WW32 RNU6-1028P-201ENST00000517164 93 ntBASIC5.33□□□□□ -1.56
HMGB4Q8WW32 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.33□□□□□ -1.56
HMGB4Q8WW32 OR8I1P-201ENST00000529291 931 ntBASIC5.33□□□□□ -1.56
HMGB4Q8WW32 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.33□□□□□ -1.56
HMGB4Q8WW32 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.33□□□□□ -1.56
HMGB4Q8WW32 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC5.33□□□□□ -1.56
HMGB4Q8WW32 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
HMGB4Q8WW32 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.33□□□□□ -1.56
HMGB4Q8WW32 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.33□□□□□ -1.56
HMGB4Q8WW32 AC027104.1-201ENST00000563702 681 ntBASIC5.33□□□□□ -1.56
HMGB4Q8WW32 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.33□□□□□ -1.56
HMGB4Q8WW32 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.33□□□□□ -1.56
HMGB4Q8WW32 RN7SL356P-201ENST00000582228 248 ntBASIC5.33□□□□□ -1.56
HMGB4Q8WW32 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.33□□□□□ -1.56
HMGB4Q8WW32 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.33□□□□□ -1.56
HMGB4Q8WW32 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.33□□□□□ -1.56
HMGB4Q8WW32 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.33□□□□□ -1.56
HMGB4Q8WW32 RNU4-5P-201ENST00000607255 135 ntBASIC5.33□□□□□ -1.56
HMGB4Q8WW32 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.33□□□□□ -1.56
HMGB4Q8WW32 AC109809.1-201ENST00000619665 545 ntBASIC5.33□□□□□ -1.56
HMGB4Q8WW32 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC5.33□□□□□ -1.56
HMGB4Q8WW32 AC091905.4-201ENST00000623432 202 ntBASIC5.33□□□□□ -1.56
HMGB4Q8WW32 AC097520.1-201ENST00000624435 385 ntBASIC5.33□□□□□ -1.56
HMGB4Q8WW32 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HMGB4Q8WW32 LINC01808-202ENST00000641680 1116 ntBASIC5.33□□□□□ -1.56
HMGB4Q8WW32 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.33□□□□□ -1.56
HMGB4Q8WW32 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HMGB4Q8WW32 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.33□□□□□ -1.56
HMGB4Q8WW32 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.33□□□□□ -1.56
HMGB4Q8WW32 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HMGB4Q8WW32 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HMGB4Q8WW32 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HMGB4Q8WW32 SCARNA15-201ENST00000607520 4325 ntBASIC5.33□□□□□ -1.56
HMGB4Q8WW32 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
HMGB4Q8WW32 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMGB4Q8WW32 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMGB4Q8WW32 AC092747.4-201ENST00000620519 1861 ntBASIC5.32□□□□□ -1.56
HMGB4Q8WW32 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMGB4Q8WW32 AL158152.1-201ENST00000602652 1435 ntBASIC5.32□□□□□ -1.56
HMGB4Q8WW32 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.32□□□□□ -1.56
HMGB4Q8WW32 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HMGB4Q8WW32 AC114774.1-201ENST00000507410 1770 ntBASIC5.32□□□□□ -1.56
HMGB4Q8WW32 INTS6P1-201ENST00000504674 2530 ntBASIC5.32□□□□□ -1.56
HMGB4Q8WW32 AC068870.3-201ENST00000625077 2536 ntBASIC5.32□□□□□ -1.56
HMGB4Q8WW32 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.32□□□□□ -1.56
HMGB4Q8WW32 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMGB4Q8WW32 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HMGB4Q8WW32 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HMGB4Q8WW32 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMGB4Q8WW32 RPL7P27-201ENST00000403775 720 ntBASIC5.32□□□□□ -1.56
HMGB4Q8WW32 RN7SKP17-201ENST00000411242 351 ntBASIC5.32□□□□□ -1.56
HMGB4Q8WW32 MTATP6P20-201ENST00000414147 562 ntBASIC5.32□□□□□ -1.56
HMGB4Q8WW32 LINC01881-201ENST00000416103 412 ntBASIC5.32□□□□□ -1.56
HMGB4Q8WW32 AL354868.1-201ENST00000417077 482 ntBASIC5.32□□□□□ -1.56
HMGB4Q8WW32 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.32□□□□□ -1.56
HMGB4Q8WW32 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.32□□□□□ -1.56
HMGB4Q8WW32 ARL5AP2-201ENST00000444698 533 ntBASIC5.32□□□□□ -1.56
HMGB4Q8WW32 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.32□□□□□ -1.56
HMGB4Q8WW32 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.32□□□□□ -1.56
HMGB4Q8WW32 CBX1P2-201ENST00000453841 458 ntBASIC5.32□□□□□ -1.56
HMGB4Q8WW32 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.32□□□□□ -1.56
HMGB4Q8WW32 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.32□□□□□ -1.56
HMGB4Q8WW32 RPS12P31-201ENST00000491419 398 ntBASIC5.32□□□□□ -1.56
HMGB4Q8WW32 AC105233.1-201ENST00000498840 781 ntBASIC5.32□□□□□ -1.56
HMGB4Q8WW32 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.32□□□□□ -1.56
HMGB4Q8WW32 AC093720.1-201ENST00000505681 714 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms