Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC107398.1-201ENST00000486904 505 ntBASIC5.94□□□□□ -1.46
ATG4DQ86TL0 NPM1P27-201ENST00000502784 830 ntBASIC5.94□□□□□ -1.46
ATG4DQ86TL0 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC5.94□□□□□ -1.46
ATG4DQ86TL0 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
ATG4DQ86TL0 SAP18P1-201ENST00000512058 390 ntBASIC5.94□□□□□ -1.46
ATG4DQ86TL0 AC093677.1-201ENST00000514414 678 ntBASIC5.94□□□□□ -1.46
ATG4DQ86TL0 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC5.94□□□□□ -1.46
ATG4DQ86TL0 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.94□□□□□ -1.46
ATG4DQ86TL0 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.94□□□□□ -1.46
ATG4DQ86TL0 AL512360.1-201ENST00000555346 234 ntBASIC5.94□□□□□ -1.46
ATG4DQ86TL0 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.94□□□□□ -1.46
ATG4DQ86TL0 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.94□□□□□ -1.46
ATG4DQ86TL0 RPL29P33-201ENST00000587474 316 ntBASIC5.94□□□□□ -1.46
ATG4DQ86TL0 MEMO1P5-201ENST00000604810 406 ntBASIC5.94□□□□□ -1.46
ATG4DQ86TL0 AC008250.2-201ENST00000615261 205 ntBASIC5.94□□□□□ -1.46
ATG4DQ86TL0 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.94□□□□□ -1.46
ATG4DQ86TL0 AL445670.1-201ENST00000618889 801 ntBASIC5.94□□□□□ -1.46
ATG4DQ86TL0 AL139089.1-201ENST00000620372 975 ntBASIC5.94□□□□□ -1.46
ATG4DQ86TL0 AP000648.2-201ENST00000624182 404 ntBASIC5.94□□□□□ -1.46
ATG4DQ86TL0 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.94□□□□□ -1.46
ATG4DQ86TL0 LCOR-201ENST00000286067 4542 ntBASIC5.94□□□□□ -1.46
ATG4DQ86TL0 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
ATG4DQ86TL0 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
ATG4DQ86TL0 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC5.94□□□□□ -1.46
ATG4DQ86TL0 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.94□□□□□ -1.46
ATG4DQ86TL0 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.94□□□□□ -1.46
ATG4DQ86TL0 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
ATG4DQ86TL0 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
ATG4DQ86TL0 AC132825.1-201ENST00000463573 2247 ntBASIC5.94□□□□□ -1.46
ATG4DQ86TL0 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC5.94□□□□□ -1.46
ATG4DQ86TL0 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
ATG4DQ86TL0 AC023245.2-201ENST00000530760 2978 ntBASIC5.94□□□□□ -1.46
ATG4DQ86TL0 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC5.94□□□□□ -1.46
ATG4DQ86TL0 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
ATG4DQ86TL0 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 AC006213.6-201ENST00000623722 4179 ntBASIC5.93□□□□□ -1.46
ATG4DQ86TL0 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 RPL11P4-201ENST00000332269 436 ntBASIC5.93□□□□□ -1.46
ATG4DQ86TL0 RNA5SP140-201ENST00000364524 92 ntBASIC5.93□□□□□ -1.46
ATG4DQ86TL0 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 RNU6-574P-201ENST00000384265 107 ntBASIC5.93□□□□□ -1.46
ATG4DQ86TL0 SNORD94-201ENST00000386037 137 ntBASIC5.93□□□□□ -1.46
ATG4DQ86TL0 SNORD65.1-201ENST00000390889 71 ntBASIC5.93□□□□□ -1.46
ATG4DQ86TL0 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 AC026310.1-201ENST00000396004 378 ntBASIC5.93□□□□□ -1.46
ATG4DQ86TL0 YWHAZP6-201ENST00000399764 738 ntBASIC5.93□□□□□ -1.46
ATG4DQ86TL0 HMGB3P18-201ENST00000406327 590 ntBASIC5.93□□□□□ -1.46
ATG4DQ86TL0 AL033519.1-201ENST00000407266 307 ntBASIC5.93□□□□□ -1.46
ATG4DQ86TL0 RN7SKP146-201ENST00000410242 334 ntBASIC5.93□□□□□ -1.46
ATG4DQ86TL0 RSU1P3-201ENST00000412878 835 ntBASIC5.93□□□□□ -1.46
ATG4DQ86TL0 RPS21P8-201ENST00000413365 247 ntBASIC5.93□□□□□ -1.46
ATG4DQ86TL0 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 AC093698.1-201ENST00000423843 571 ntBASIC5.93□□□□□ -1.46
ATG4DQ86TL0 AC002069.1-201ENST00000429649 1159 ntBASIC5.93□□□□□ -1.46
ATG4DQ86TL0 AL358934.1-201ENST00000432346 324 ntBASIC5.93□□□□□ -1.46
ATG4DQ86TL0 SDCBPP1-201ENST00000440192 890 ntBASIC5.93□□□□□ -1.46
ATG4DQ86TL0 AL031681.1-201ENST00000443304 400 ntBASIC5.93□□□□□ -1.46
ATG4DQ86TL0 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 AC140076.1-201ENST00000449897 361 ntBASIC5.93□□□□□ -1.46
ATG4DQ86TL0 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 RNU7-157P-201ENST00000459600 66 ntBASIC5.93□□□□□ -1.46
ATG4DQ86TL0 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 AP003385.3-201ENST00000472498 287 ntBASIC5.93□□□□□ -1.46
ATG4DQ86TL0 ACTG1P13-201ENST00000486987 1043 ntBASIC5.93□□□□□ -1.46
ATG4DQ86TL0 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.93□□□□□ -1.46
ATG4DQ86TL0 MINOS1P4-201ENST00000515470 318 ntBASIC5.93□□□□□ -1.46
ATG4DQ86TL0 AC138517.1-201ENST00000515724 568 ntBASIC5.93□□□□□ -1.46
ATG4DQ86TL0 AC087808.1-201ENST00000520501 361 ntBASIC5.93□□□□□ -1.46
ATG4DQ86TL0 AP005597.4-201ENST00000526762 229 ntBASIC5.93□□□□□ -1.46
ATG4DQ86TL0 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 AC005519.1-201ENST00000554490 601 ntBASIC5.93□□□□□ -1.46
ATG4DQ86TL0 AC025678.1-201ENST00000567861 338 ntBASIC5.93□□□□□ -1.46
ATG4DQ86TL0 AL355375.2-201ENST00000574825 175 ntBASIC5.93□□□□□ -1.46
ATG4DQ86TL0 RN7SL208P-201ENST00000577964 296 ntBASIC5.93□□□□□ -1.46
ATG4DQ86TL0 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 AC006504.6-201ENST00000590142 199 ntBASIC5.93□□□□□ -1.46
ATG4DQ86TL0 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC5.93□□□□□ -1.46
ATG4DQ86TL0 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms