Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PTCHD4Q6ZW05 DDX18P5-201ENST00000534547 1306 ntBASIC5.14□□□□□ -1.59
PTCHD4Q6ZW05 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
PTCHD4Q6ZW05 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.14□□□□□ -1.59
PTCHD4Q6ZW05 AC083899.1-201ENST00000454465 3819 ntBASIC5.14□□□□□ -1.59
PTCHD4Q6ZW05 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PTCHD4Q6ZW05 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 AC104966.1-201ENST00000467010 1464 ntBASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 AC006206.1-201ENST00000544842 3387 ntBASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 TMSB4XP2-201ENST00000335179 210 ntBASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 NACA3P-201ENST00000359690 648 ntBASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 RNA5SP500-201ENST00000364486 119 ntBASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 MIR1275-201ENST00000408770 80 ntBASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 AL357752.1-201ENST00000412817 349 ntBASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 LINC01881-201ENST00000416103 412 ntBASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 HMGN2P27-201ENST00000427352 270 ntBASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 COX7BP2-201ENST00000437976 242 ntBASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 TIMM8BP2-201ENST00000445940 251 ntBASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 PPIAP27-201ENST00000453800 265 ntBASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 AC009963.3-201ENST00000458090 486 ntBASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 AC023194.2-201ENST00000465398 406 ntBASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 AC104339.1-201ENST00000465478 348 ntBASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 AC037198.2-201ENST00000478845 733 ntBASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 RN7SL193P-201ENST00000491708 276 ntBASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 AC104108.1-201ENST00000509930 412 ntBASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 AC074255.1-201ENST00000511259 501 ntBASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 RNU6-1129P-201ENST00000515964 104 ntBASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 AC139365.2-201ENST00000517972 253 ntBASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 AC107918.3-201ENST00000533272 382 ntBASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 MIR3154-201ENST00000577829 84 ntBASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 DPRXP5-201ENST00000604662 539 ntBASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 AC018638.7-201ENST00000605836 1114 ntBASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 AP001437.1-201ENST00000608783 456 ntBASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 AC021106.3-201ENST00000623925 531 ntBASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 AC007490.1-201ENST00000624321 703 ntBASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 AC107027.3-201ENST00000565095 3473 ntBASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
PTCHD4Q6ZW05 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 AC092376.2-201ENST00000622621 4116 ntBASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 AL121950.1-201ENST00000624993 2077 ntBASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 AC018809.2-201ENST00000602436 3823 ntBASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 AC000367.1-201ENST00000452711 1766 ntBASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 AL079342.2-201ENST00000403367 482 ntBASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.12□□□□□ -1.59
PTCHD4Q6ZW05 MTND4P22-201ENST00000413116 1169 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms