Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.83□□□□□ -1.64
CBX1P83916 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC4.83□□□□□ -1.64
CBX1P83916 SNORA43.3-201ENST00000517240 103 ntBASIC4.83□□□□□ -1.64
CBX1P83916 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.83□□□□□ -1.64
CBX1P83916 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.83□□□□□ -1.64
CBX1P83916 AC093249.4-201ENST00000564755 259 ntBASIC4.83□□□□□ -1.64
CBX1P83916 RBM22P1-201ENST00000578589 1214 ntBASIC4.83□□□□□ -1.64
CBX1P83916 SNORA74C-1-201ENST00000580726 201 ntBASIC4.83□□□□□ -1.64
CBX1P83916 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.83□□□□□ -1.64
CBX1P83916 ELOCP28-201ENST00000590044 317 ntBASIC4.83□□□□□ -1.64
CBX1P83916 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.83□□□□□ -1.64
CBX1P83916 HMGB2P1-201ENST00000591146 634 ntBASIC4.83□□□□□ -1.64
CBX1P83916 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.83□□□□□ -1.64
CBX1P83916 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CBX1P83916 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.83□□□□□ -1.64
CBX1P83916 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CBX1P83916 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CBX1P83916 AC097504.1-201ENST00000515103 2415 ntBASIC4.83□□□□□ -1.64
CBX1P83916 AC110792.3-201ENST00000595906 1614 ntBASIC4.83□□□□□ -1.64
CBX1P83916 AC087565.3-202ENST00000642085 1603 ntBASIC4.83□□□□□ -1.64
CBX1P83916 SAMMSON-226ENST00000642089 1582 ntBASIC4.82□□□□□ -1.64
CBX1P83916 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.82□□□□□ -1.64
CBX1P83916 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CBX1P83916 AC105074.1-201ENST00000623380 3095 ntBASIC4.82□□□□□ -1.64
CBX1P83916 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
CBX1P83916 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CBX1P83916 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CBX1P83916 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.82□□□□□ -1.64
CBX1P83916 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CBX1P83916 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CBX1P83916 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.82□□□□□ -1.64
CBX1P83916 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CBX1P83916 AC107977.1-201ENST00000355745 939 ntBASIC4.82□□□□□ -1.64
CBX1P83916 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CBX1P83916 RN7SKP269-201ENST00000365545 319 ntBASIC4.82□□□□□ -1.64
CBX1P83916 RNU1-44P-201ENST00000384453 163 ntBASIC4.82□□□□□ -1.64
CBX1P83916 RNU1-89P-201ENST00000384592 164 ntBASIC4.82□□□□□ -1.64
CBX1P83916 AMD1P2-201ENST00000412936 992 ntBASIC4.82□□□□□ -1.64
CBX1P83916 AC013470.3-201ENST00000420252 1194 ntBASIC4.82□□□□□ -1.64
CBX1P83916 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.82□□□□□ -1.64
CBX1P83916 AC007064.3-201ENST00000422608 359 ntBASIC4.82□□□□□ -1.64
CBX1P83916 RPL23AP4-201ENST00000427757 463 ntBASIC4.82□□□□□ -1.64
CBX1P83916 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.82□□□□□ -1.64
CBX1P83916 AL451139.1-201ENST00000434718 346 ntBASIC4.82□□□□□ -1.64
CBX1P83916 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.82□□□□□ -1.64
CBX1P83916 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CBX1P83916 AL162388.1-201ENST00000450912 352 ntBASIC4.82□□□□□ -1.64
CBX1P83916 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.82□□□□□ -1.64
CBX1P83916 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.82□□□□□ -1.64
CBX1P83916 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.82□□□□□ -1.64
CBX1P83916 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.82□□□□□ -1.64
CBX1P83916 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.82□□□□□ -1.64
CBX1P83916 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.82□□□□□ -1.64
CBX1P83916 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC4.82□□□□□ -1.64
CBX1P83916 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.82□□□□□ -1.64
CBX1P83916 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CBX1P83916 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CBX1P83916 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.82□□□□□ -1.64
CBX1P83916 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC4.82□□□□□ -1.64
CBX1P83916 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CBX1P83916 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC4.82□□□□□ -1.64
CBX1P83916 AC091178.1-203ENST00000584586 279 ntBASIC4.82□□□□□ -1.64
CBX1P83916 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CBX1P83916 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CBX1P83916 AC023813.4-201ENST00000607580 580 ntBASIC4.82□□□□□ -1.64
CBX1P83916 AC019131.2-201ENST00000609071 870 ntBASIC4.82□□□□□ -1.64
CBX1P83916 AL645927.2-201ENST00000618350 349 ntBASIC4.82□□□□□ -1.64
CBX1P83916 BMS1P21-201ENST00000634565 365 ntBASIC4.82□□□□□ -1.64
CBX1P83916 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.82□□□□□ -1.64
CBX1P83916 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CBX1P83916 AC010300.1-201ENST00000600671 5134 ntBASIC4.82□□□□□ -1.64
CBX1P83916 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CBX1P83916 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC4.81□□□□□ -1.64
CBX1P83916 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.81□□□□□ -1.64
CBX1P83916 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CBX1P83916 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CBX1P83916 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CBX1P83916 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CBX1P83916 MIR133B-201ENST00000362210 119 ntBASIC4.81□□□□□ -1.64
CBX1P83916 RN7SKP160-201ENST00000363804 340 ntBASIC4.81□□□□□ -1.64
CBX1P83916 RNU6-1251P-201ENST00000364502 107 ntBASIC4.81□□□□□ -1.64
CBX1P83916 AL034403.1-201ENST00000399414 885 ntBASIC4.81□□□□□ -1.64
CBX1P83916 AL021331.1-201ENST00000402817 582 ntBASIC4.81□□□□□ -1.64
CBX1P83916 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC4.81□□□□□ -1.64
CBX1P83916 HMGB1P32-201ENST00000425971 565 ntBASIC4.81□□□□□ -1.64
CBX1P83916 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.81□□□□□ -1.64
CBX1P83916 GSTA7P-201ENST00000438425 448 ntBASIC4.81□□□□□ -1.64
CBX1P83916 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.81□□□□□ -1.64
CBX1P83916 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.81□□□□□ -1.64
CBX1P83916 AL035551.1-201ENST00000446931 348 ntBASIC4.81□□□□□ -1.64
CBX1P83916 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.81□□□□□ -1.64
CBX1P83916 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.81□□□□□ -1.64
CBX1P83916 AC022431.1-201ENST00000450941 438 ntBASIC4.81□□□□□ -1.64
CBX1P83916 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CBX1P83916 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.81□□□□□ -1.64
CBX1P83916 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.81□□□□□ -1.64
CBX1P83916 AC117525.1-201ENST00000515228 503 ntBASIC4.81□□□□□ -1.64
CBX1P83916 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.81□□□□□ -1.64
CBX1P83916 EIF1AXP2-201ENST00000555940 413 ntBASIC4.81□□□□□ -1.64
CBX1P83916 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms