Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
TPM4P67936 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TPM4P67936 AC067945.1-201ENST00000342609 618 ntBASIC5.1□□□□□ -1.59
TPM4P67936 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
TPM4P67936 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
TPM4P67936 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
TPM4P67936 GCNT6-201ENST00000379591 934 ntBASIC5.1□□□□□ -1.59
TPM4P67936 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TPM4P67936 RNU1-63P-201ENST00000383902 164 ntBASIC5.1□□□□□ -1.59
TPM4P67936 ATP5F1P2-201ENST00000398143 760 ntBASIC5.1□□□□□ -1.59
TPM4P67936 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.1□□□□□ -1.59
TPM4P67936 VN2R3P-201ENST00000422626 1412 ntBASIC5.1□□□□□ -1.59
TPM4P67936 SKP1P3-201ENST00000429280 487 ntBASIC5.1□□□□□ -1.59
TPM4P67936 ISCUP1-201ENST00000454451 448 ntBASIC5.1□□□□□ -1.59
TPM4P67936 AC092905.1-201ENST00000467527 949 ntBASIC5.1□□□□□ -1.59
TPM4P67936 AC135352.1-201ENST00000506173 1418 ntBASIC5.1□□□□□ -1.59
TPM4P67936 AC015795.1-201ENST00000513669 327 ntBASIC5.1□□□□□ -1.59
TPM4P67936 RN7SKP34-201ENST00000516142 244 ntBASIC5.1□□□□□ -1.59
TPM4P67936 AP002981.1-201ENST00000517692 975 ntBASIC5.1□□□□□ -1.59
TPM4P67936 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.1□□□□□ -1.59
TPM4P67936 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.1□□□□□ -1.59
TPM4P67936 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.1□□□□□ -1.59
TPM4P67936 CD24P2-201ENST00000565486 219 ntBASIC5.1□□□□□ -1.59
TPM4P67936 AC067838.1-201ENST00000606064 577 ntBASIC5.1□□□□□ -1.59
TPM4P67936 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.1□□□□□ -1.59
TPM4P67936 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.1□□□□□ -1.59
TPM4P67936 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.1□□□□□ -1.59
TPM4P67936 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
TPM4P67936 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
TPM4P67936 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TPM4P67936 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.09□□□□□ -1.59
TPM4P67936 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
TPM4P67936 SNORA74A-201ENST00000364089 198 ntBASIC5.09□□□□□ -1.59
TPM4P67936 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.09□□□□□ -1.59
TPM4P67936 VN1R8P-201ENST00000407739 893 ntBASIC5.09□□□□□ -1.59
TPM4P67936 AL353748.1-201ENST00000440753 474 ntBASIC5.09□□□□□ -1.59
TPM4P67936 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.09□□□□□ -1.59
TPM4P67936 AC010733.1-201ENST00000451515 401 ntBASIC5.09□□□□□ -1.59
TPM4P67936 AL121877.1-201ENST00000453704 622 ntBASIC5.09□□□□□ -1.59
TPM4P67936 AURKAPS2-201ENST00000454983 333 ntBASIC5.09□□□□□ -1.59
TPM4P67936 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.09□□□□□ -1.59
TPM4P67936 AC006499.6-201ENST00000511169 607 ntBASIC5.09□□□□□ -1.59
TPM4P67936 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TPM4P67936 OR10G5P-201ENST00000532733 358 ntBASIC5.09□□□□□ -1.59
TPM4P67936 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.09□□□□□ -1.59
TPM4P67936 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.09□□□□□ -1.59
TPM4P67936 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.09□□□□□ -1.59
TPM4P67936 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
TPM4P67936 AL139395.1-201ENST00000603662 160 ntBASIC5.09□□□□□ -1.59
TPM4P67936 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.09□□□□□ -1.59
TPM4P67936 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TPM4P67936 MIR6861-201ENST00000618657 64 ntBASIC5.09□□□□□ -1.59
TPM4P67936 AC010809.3-201ENST00000621310 641 ntBASIC5.09□□□□□ -1.59
TPM4P67936 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.09□□□□□ -1.59
TPM4P67936 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.09□□□□□ -1.59
TPM4P67936 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TPM4P67936 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TPM4P67936 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.09□□□□□ -1.6
TPM4P67936 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.08□□□□□ -1.6
TPM4P67936 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TPM4P67936 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
TPM4P67936 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.08□□□□□ -1.6
TPM4P67936 ANKRD20A10P-201ENST00000457591 1515 ntBASIC5.08□□□□□ -1.6
TPM4P67936 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TPM4P67936 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TPM4P67936 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.08□□□□□ -1.6
TPM4P67936 NXPH1-205ENST00000602349 1953 ntBASIC5.08□□□□□ -1.6
TPM4P67936 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TPM4P67936 RN7SKP224-201ENST00000364140 325 ntBASIC5.08□□□□□ -1.6
TPM4P67936 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.08□□□□□ -1.6
TPM4P67936 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TPM4P67936 MIR1282-201ENST00000408865 101 ntBASIC5.08□□□□□ -1.6
TPM4P67936 AC112498.1-201ENST00000444401 332 ntBASIC5.08□□□□□ -1.6
TPM4P67936 AC104306.1-201ENST00000449702 371 ntBASIC5.08□□□□□ -1.6
TPM4P67936 MYO5BP2-201ENST00000449815 1277 ntBASIC5.08□□□□□ -1.6
TPM4P67936 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.08□□□□□ -1.6
TPM4P67936 CCDC75P1-201ENST00000469247 791 ntBASIC5.08□□□□□ -1.6
TPM4P67936 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.08□□□□□ -1.6
TPM4P67936 GAPDHP56-201ENST00000506031 988 ntBASIC5.08□□□□□ -1.6
TPM4P67936 HIGD1AP14-201ENST00000507617 282 ntBASIC5.08□□□□□ -1.6
TPM4P67936 RN7SKP147-201ENST00000517154 244 ntBASIC5.08□□□□□ -1.6
TPM4P67936 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.08□□□□□ -1.6
TPM4P67936 IGLV3-26-201ENST00000520756 302 ntBASIC5.08□□□□□ -1.6
TPM4P67936 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.08□□□□□ -1.6
TPM4P67936 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.08□□□□□ -1.6
TPM4P67936 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TPM4P67936 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TPM4P67936 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.08□□□□□ -1.6
TPM4P67936 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.08□□□□□ -1.6
TPM4P67936 AC026124.2-201ENST00000621847 656 ntBASIC5.08□□□□□ -1.6
TPM4P67936 AP003499.2-201ENST00000624100 483 ntBASIC5.08□□□□□ -1.6
TPM4P67936 AL356121.2-201ENST00000624715 780 ntBASIC5.08□□□□□ -1.6
TPM4P67936 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC5.08□□□□□ -1.6
TPM4P67936 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TPM4P67936 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.08□□□□□ -1.6
TPM4P67936 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TPM4P67936 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.08□□□□□ -1.6
TPM4P67936 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.08□□□□□ -1.6
TPM4P67936 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
TPM4P67936 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms