Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC106806.2-201ENST00000509365 500 ntBASIC4.59□□□□□ -1.67
CLDN6P56747 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.59□□□□□ -1.67
CLDN6P56747 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.59□□□□□ -1.67
CLDN6P56747 MTCO1P35-201ENST00000515270 228 ntBASIC4.59□□□□□ -1.67
CLDN6P56747 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.59□□□□□ -1.67
CLDN6P56747 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.59□□□□□ -1.67
CLDN6P56747 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.59□□□□□ -1.67
CLDN6P56747 CYCSP29-201ENST00000533731 318 ntBASIC4.59□□□□□ -1.67
CLDN6P56747 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.59□□□□□ -1.67
CLDN6P56747 DUX4L52-201ENST00000549363 777 ntBASIC4.59□□□□□ -1.67
CLDN6P56747 AC006349.1-201ENST00000555526 235 ntBASIC4.59□□□□□ -1.67
CLDN6P56747 AL121839.1-201ENST00000556233 1185 ntBASIC4.59□□□□□ -1.67
CLDN6P56747 NDUFB4P11-201ENST00000560510 395 ntBASIC4.59□□□□□ -1.67
CLDN6P56747 AC007224.1-201ENST00000564410 144 ntBASIC4.59□□□□□ -1.67
CLDN6P56747 AC093249.4-201ENST00000564755 259 ntBASIC4.59□□□□□ -1.67
CLDN6P56747 AC084783.1-201ENST00000565846 910 ntBASIC4.59□□□□□ -1.67
CLDN6P56747 AC106785.1-201ENST00000565935 262 ntBASIC4.59□□□□□ -1.67
CLDN6P56747 MIR3138-201ENST00000585238 82 ntBASIC4.59□□□□□ -1.67
CLDN6P56747 AC010424.2-201ENST00000607594 443 ntBASIC4.59□□□□□ -1.67
CLDN6P56747 AC009950.2-201ENST00000636548 183 ntBASIC4.59□□□□□ -1.67
CLDN6P56747 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
CLDN6P56747 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
CLDN6P56747 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
CLDN6P56747 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
CLDN6P56747 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.59□□□□□ -1.68
CLDN6P56747 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
CLDN6P56747 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN6P56747 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN6P56747 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.58□□□□□ -1.68
CLDN6P56747 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN6P56747 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN6P56747 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.58□□□□□ -1.68
CLDN6P56747 AC008758.3-201ENST00000507003 1829 ntBASIC4.58□□□□□ -1.68
CLDN6P56747 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN6P56747 AC025031.4-201ENST00000621248 3271 ntBASIC4.58□□□□□ -1.68
CLDN6P56747 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.58□□□□□ -1.68
CLDN6P56747 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.58□□□□□ -1.68
CLDN6P56747 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CLDN6P56747 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN6P56747 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN6P56747 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN6P56747 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN6P56747 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.58□□□□□ -1.68
CLDN6P56747 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.58□□□□□ -1.68
CLDN6P56747 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CLDN6P56747 AL359837.1-201ENST00000381357 287 ntBASIC4.58□□□□□ -1.68
CLDN6P56747 RNA5SP397-201ENST00000391323 118 ntBASIC4.58□□□□□ -1.68
CLDN6P56747 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CLDN6P56747 RN7SKP263-201ENST00000411194 309 ntBASIC4.58□□□□□ -1.68
CLDN6P56747 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.58□□□□□ -1.68
CLDN6P56747 COX6CP13-201ENST00000428703 226 ntBASIC4.58□□□□□ -1.68
CLDN6P56747 AC023141.6-201ENST00000429418 337 ntBASIC4.58□□□□□ -1.68
CLDN6P56747 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.58□□□□□ -1.68
CLDN6P56747 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.58□□□□□ -1.68
CLDN6P56747 RPS17P2-201ENST00000461663 408 ntBASIC4.58□□□□□ -1.68
CLDN6P56747 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CLDN6P56747 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.58□□□□□ -1.68
CLDN6P56747 NIFKP7-201ENST00000503365 834 ntBASIC4.58□□□□□ -1.68
CLDN6P56747 AC025423.2-201ENST00000537570 439 ntBASIC4.58□□□□□ -1.68
CLDN6P56747 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.58□□□□□ -1.68
CLDN6P56747 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.58□□□□□ -1.68
CLDN6P56747 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.58□□□□□ -1.68
CLDN6P56747 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.58□□□□□ -1.68
CLDN6P56747 RN7SL802P-201ENST00000577858 299 ntBASIC4.58□□□□□ -1.68
CLDN6P56747 MIR5699-201ENST00000578903 90 ntBASIC4.58□□□□□ -1.68
CLDN6P56747 AC069061.3-201ENST00000582254 823 ntBASIC4.58□□□□□ -1.68
CLDN6P56747 AC011477.5-201ENST00000586571 259 ntBASIC4.58□□□□□ -1.68
CLDN6P56747 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.58□□□□□ -1.68
CLDN6P56747 VN1R85P-201ENST00000601587 426 ntBASIC4.58□□□□□ -1.68
CLDN6P56747 MIR92B-201ENST00000607575 96 ntBASIC4.58□□□□□ -1.68
CLDN6P56747 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN6P56747 AC006840.1-201ENST00000623069 542 ntBASIC4.58□□□□□ -1.68
CLDN6P56747 CR381572.2-201ENST00000624852 397 ntBASIC4.58□□□□□ -1.68
CLDN6P56747 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.58□□□□□ -1.68
CLDN6P56747 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.58□□□□□ -1.68
CLDN6P56747 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN6P56747 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.58□□□□□ -1.68
CLDN6P56747 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN6P56747 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.58□□□□□ -1.68
CLDN6P56747 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.58□□□□□ -1.68
CLDN6P56747 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN6P56747 AL731566.1-201ENST00000620490 1937 ntBASIC4.58□□□□□ -1.68
CLDN6P56747 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN6P56747 AC004817.4-201ENST00000602396 3625 ntBASIC4.58□□□□□ -1.68
CLDN6P56747 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.57□□□□□ -1.68
CLDN6P56747 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN6P56747 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CLDN6P56747 AL121657.1-201ENST00000327215 531 ntBASIC4.57□□□□□ -1.68
CLDN6P56747 RNU6-1331P-201ENST00000363658 106 ntBASIC4.57□□□□□ -1.68
CLDN6P56747 RNU6-1263P-201ENST00000384601 106 ntBASIC4.57□□□□□ -1.68
CLDN6P56747 OR6C69P-201ENST00000394268 893 ntBASIC4.57□□□□□ -1.68
CLDN6P56747 ST13P16-201ENST00000401760 781 ntBASIC4.57□□□□□ -1.68
CLDN6P56747 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.57□□□□□ -1.68
CLDN6P56747 SEPT7P8-201ENST00000413308 775 ntBASIC4.57□□□□□ -1.68
CLDN6P56747 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.57□□□□□ -1.68
CLDN6P56747 RPS27AP12-201ENST00000429552 465 ntBASIC4.57□□□□□ -1.68
CLDN6P56747 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.57□□□□□ -1.68
CLDN6P56747 AC097523.2-201ENST00000435551 652 ntBASIC4.57□□□□□ -1.68
CLDN6P56747 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.57□□□□□ -1.68
CLDN6P56747 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms