Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
EPHB4P54760 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
EPHB4P54760 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
EPHB4P54760 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.24□□□□□ -1.41
EPHB4P54760 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
EPHB4P54760 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
EPHB4P54760 SNORA5.1-201ENST00000384275 131 ntBASIC6.24□□□□□ -1.41
EPHB4P54760 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.24□□□□□ -1.41
EPHB4P54760 RAP1BP1-201ENST00000412709 553 ntBASIC6.24□□□□□ -1.41
EPHB4P54760 AF274854.1-201ENST00000413236 615 ntBASIC6.24□□□□□ -1.41
EPHB4P54760 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.24□□□□□ -1.41
EPHB4P54760 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC6.24□□□□□ -1.41
EPHB4P54760 VN1R31P-201ENST00000417498 730 ntBASIC6.24□□□□□ -1.41
EPHB4P54760 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.24□□□□□ -1.41
EPHB4P54760 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC6.24□□□□□ -1.41
EPHB4P54760 AL031667.1-201ENST00000440222 725 ntBASIC6.24□□□□□ -1.41
EPHB4P54760 AL663074.2-201ENST00000440621 479 ntBASIC6.24□□□□□ -1.41
EPHB4P54760 CEACAMP9-201ENST00000442990 513 ntBASIC6.24□□□□□ -1.41
EPHB4P54760 TRY2P-201ENST00000448860 689 ntBASIC6.24□□□□□ -1.41
EPHB4P54760 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC6.24□□□□□ -1.41
EPHB4P54760 OR52Y1P-201ENST00000452418 828 ntBASIC6.24□□□□□ -1.41
EPHB4P54760 DNAJB5P1-201ENST00000454004 806 ntBASIC6.24□□□□□ -1.41
EPHB4P54760 RPL12P39-201ENST00000455456 496 ntBASIC6.24□□□□□ -1.41
EPHB4P54760 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC6.24□□□□□ -1.41
EPHB4P54760 ACA64.4-201ENST00000459070 127 ntBASIC6.24□□□□□ -1.41
EPHB4P54760 RN7SL197P-201ENST00000466981 299 ntBASIC6.24□□□□□ -1.41
EPHB4P54760 CEACAMP10-202ENST00000495431 496 ntBASIC6.24□□□□□ -1.41
EPHB4P54760 MGST2-204ENST00000506797 634 ntTSL 2 BASIC6.24□□□□□ -1.41
EPHB4P54760 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.24□□□□□ -1.41
EPHB4P54760 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC6.24□□□□□ -1.41
EPHB4P54760 AC078899.1-201ENST00000521432 1185 ntBASIC6.24□□□□□ -1.41
EPHB4P54760 BUD31P1-201ENST00000521828 359 ntBASIC6.24□□□□□ -1.41
EPHB4P54760 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.24□□□□□ -1.41
EPHB4P54760 MTND4LP18-201ENST00000526864 291 ntBASIC6.24□□□□□ -1.41
EPHB4P54760 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC6.24□□□□□ -1.41
EPHB4P54760 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC6.24□□□□□ -1.41
EPHB4P54760 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.24□□□□□ -1.41
EPHB4P54760 MIR4480-201ENST00000582492 71 ntBASIC6.24□□□□□ -1.41
EPHB4P54760 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.24□□□□□ -1.41
EPHB4P54760 AC103591.3-201ENST00000608684 209 ntBASIC6.24□□□□□ -1.41
EPHB4P54760 AC000068.2-201ENST00000608816 460 ntBASIC6.24□□□□□ -1.41
EPHB4P54760 AC096586.2-201ENST00000610260 441 ntBASIC6.24□□□□□ -1.41
EPHB4P54760 AC005609.4-201ENST00000625071 447 ntBASIC6.24□□□□□ -1.41
EPHB4P54760 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.24□□□□□ -1.41
EPHB4P54760 AC103706.2-201ENST00000638080 240 ntBASIC6.24□□□□□ -1.41
EPHB4P54760 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
EPHB4P54760 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.24□□□□□ -1.41
EPHB4P54760 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
EPHB4P54760 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
EPHB4P54760 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
EPHB4P54760 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
EPHB4P54760 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
EPHB4P54760 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
EPHB4P54760 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.23□□□□□ -1.41
EPHB4P54760 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
EPHB4P54760 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
EPHB4P54760 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
EPHB4P54760 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
EPHB4P54760 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.23□□□□□ -1.41
EPHB4P54760 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
EPHB4P54760 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.23□□□□□ -1.41
EPHB4P54760 RNA5SP305-201ENST00000362665 119 ntBASIC6.23□□□□□ -1.41
EPHB4P54760 RN7SKP185-201ENST00000362813 326 ntBASIC6.23□□□□□ -1.41
EPHB4P54760 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
EPHB4P54760 U3.23-201ENST00000391132 200 ntBASIC6.23□□□□□ -1.41
EPHB4P54760 RPL11P3-201ENST00000395256 523 ntBASIC6.23□□□□□ -1.41
EPHB4P54760 RAP1BP3-201ENST00000407180 549 ntBASIC6.23□□□□□ -1.41
EPHB4P54760 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC6.23□□□□□ -1.41
EPHB4P54760 LINC01881-201ENST00000416103 412 ntBASIC6.23□□□□□ -1.41
EPHB4P54760 NENFP1-201ENST00000419476 466 ntBASIC6.23□□□□□ -1.41
EPHB4P54760 SRSF1P1-201ENST00000424058 520 ntBASIC6.23□□□□□ -1.41
EPHB4P54760 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC6.23□□□□□ -1.41
EPHB4P54760 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC6.23□□□□□ -1.41
EPHB4P54760 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.23□□□□□ -1.41
EPHB4P54760 MTCO2P16-201ENST00000436962 677 ntBASIC6.23□□□□□ -1.41
EPHB4P54760 AC006466.1-201ENST00000438721 289 ntBASIC6.23□□□□□ -1.41
EPHB4P54760 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC6.23□□□□□ -1.41
EPHB4P54760 AC023271.1-201ENST00000445936 1090 ntBASIC6.23□□□□□ -1.41
EPHB4P54760 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC6.23□□□□□ -1.41
EPHB4P54760 RPS27AP8-201ENST00000452665 445 ntBASIC6.23□□□□□ -1.41
EPHB4P54760 VDAC2P4-201ENST00000452925 711 ntBASIC6.23□□□□□ -1.41
EPHB4P54760 AC108734.3-201ENST00000481241 1165 ntBASIC6.23□□□□□ -1.41
EPHB4P54760 TRBV8-1-201ENST00000481590 279 ntBASIC6.23□□□□□ -1.41
EPHB4P54760 AC073610.1-201ENST00000489971 396 ntBASIC6.23□□□□□ -1.41
EPHB4P54760 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
EPHB4P54760 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
EPHB4P54760 RNU6-1129P-201ENST00000515964 104 ntBASIC6.23□□□□□ -1.41
EPHB4P54760 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.23□□□□□ -1.41
EPHB4P54760 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC6.23□□□□□ -1.41
EPHB4P54760 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC6.23□□□□□ -1.41
EPHB4P54760 AC011840.5-201ENST00000582125 771 ntBASIC6.23□□□□□ -1.41
EPHB4P54760 AC069366.1-201ENST00000583159 838 ntBASIC6.23□□□□□ -1.41
EPHB4P54760 AC079880.2-201ENST00000603790 1213 ntBASIC6.23□□□□□ -1.41
EPHB4P54760 HMGB1P51-201ENST00000605166 638 ntBASIC6.23□□□□□ -1.41
EPHB4P54760 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.23□□□□□ -1.41
EPHB4P54760 AL022394.1-201ENST00000606979 292 ntBASIC6.23□□□□□ -1.41
EPHB4P54760 AL133481.2-203ENST00000607558 139 ntBASIC6.23□□□□□ -1.41
EPHB4P54760 FAM25E-202ENST00000608562 189 ntBASIC6.23□□□□□ -1.41
EPHB4P54760 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC6.23□□□□□ -1.41
EPHB4P54760 AL133243.1-201ENST00000614487 366 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms