Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.6□□□□□ -1.51
COPAP53621 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
COPAP53621 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.6□□□□□ -1.51
COPAP53621 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COPAP53621 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
COPAP53621 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
COPAP53621 RNA5SP335-201ENST00000363817 110 ntBASIC5.6□□□□□ -1.51
COPAP53621 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COPAP53621 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.6□□□□□ -1.51
COPAP53621 AP000357.1-201ENST00000409926 1165 ntBASIC5.6□□□□□ -1.51
COPAP53621 RNU2-50P-201ENST00000410494 143 ntBASIC5.6□□□□□ -1.51
COPAP53621 RN7SKP273-201ENST00000411392 314 ntBASIC5.6□□□□□ -1.51
COPAP53621 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.6□□□□□ -1.51
COPAP53621 VTA1P1-201ENST00000414044 866 ntBASIC5.6□□□□□ -1.51
COPAP53621 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.6□□□□□ -1.51
COPAP53621 NANOGP5-201ENST00000424456 877 ntBASIC5.6□□□□□ -1.51
COPAP53621 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.6□□□□□ -1.51
COPAP53621 OR52B5P-201ENST00000435337 951 ntBASIC5.6□□□□□ -1.51
COPAP53621 AC245047.2-201ENST00000441060 530 ntBASIC5.6□□□□□ -1.51
COPAP53621 AL353093.1-201ENST00000441292 436 ntBASIC5.6□□□□□ -1.51
COPAP53621 LINC02210-201ENST00000444561 288 ntBASIC5.6□□□□□ -1.51
COPAP53621 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.6□□□□□ -1.51
COPAP53621 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC5.6□□□□□ -1.51
COPAP53621 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.6□□□□□ -1.51
COPAP53621 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.6□□□□□ -1.51
COPAP53621 RPL5P22-201ENST00000480199 884 ntBASIC5.6□□□□□ -1.51
COPAP53621 AC093270.2-201ENST00000486157 792 ntBASIC5.6□□□□□ -1.51
COPAP53621 AC072052.1-201ENST00000496556 306 ntBASIC5.6□□□□□ -1.51
COPAP53621 HPRT1P1-201ENST00000509498 657 ntBASIC5.6□□□□□ -1.51
COPAP53621 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.6□□□□□ -1.51
COPAP53621 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.6□□□□□ -1.51
COPAP53621 RN7SKP287-201ENST00000516546 266 ntBASIC5.6□□□□□ -1.51
COPAP53621 RNA5SP230-201ENST00000517039 122 ntBASIC5.6□□□□□ -1.51
COPAP53621 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.6□□□□□ -1.51
COPAP53621 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.6□□□□□ -1.51
COPAP53621 AC079064.1-201ENST00000528365 362 ntBASIC5.6□□□□□ -1.51
COPAP53621 OR10G5P-201ENST00000532733 358 ntBASIC5.6□□□□□ -1.51
COPAP53621 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC5.6□□□□□ -1.51
COPAP53621 BLZF2P-201ENST00000553776 1130 ntBASIC5.6□□□□□ -1.51
COPAP53621 AL359219.2-201ENST00000555184 348 ntBASIC5.6□□□□□ -1.51
COPAP53621 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
COPAP53621 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
COPAP53621 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC5.6□□□□□ -1.51
COPAP53621 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.6□□□□□ -1.51
COPAP53621 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.6□□□□□ -1.51
COPAP53621 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.6□□□□□ -1.51
COPAP53621 AC093424.1-201ENST00000604999 338 ntBASIC5.6□□□□□ -1.51
COPAP53621 AC096586.1-201ENST00000610267 561 ntBASIC5.6□□□□□ -1.51
COPAP53621 AC009464.1-201ENST00000615731 469 ntBASIC5.6□□□□□ -1.51
COPAP53621 MIR7155-201ENST00000615925 56 ntBASIC5.6□□□□□ -1.51
COPAP53621 AC009159.2-201ENST00000617603 606 ntBASIC5.6□□□□□ -1.51
COPAP53621 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COPAP53621 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.6□□□□□ -1.51
COPAP53621 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.6□□□□□ -1.51
COPAP53621 OR52B5P-202ENST00000641118 1110 ntBASIC5.6□□□□□ -1.51
COPAP53621 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COPAP53621 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COPAP53621 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
COPAP53621 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COPAP53621 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.6□□□□□ -1.51
COPAP53621 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
COPAP53621 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
COPAP53621 AL450326.2-201ENST00000421913 1962 ntBASIC5.6□□□□□ -1.51
COPAP53621 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.6□□□□□ -1.51
COPAP53621 CASC19-284ENST00000642142 1868 ntBASIC5.6□□□□□ -1.51
COPAP53621 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
COPAP53621 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.6□□□□□ -1.51
COPAP53621 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
COPAP53621 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
COPAP53621 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.59□□□□□ -1.51
COPAP53621 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
COPAP53621 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.59□□□□□ -1.51
COPAP53621 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
COPAP53621 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
COPAP53621 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.59□□□□□ -1.51
COPAP53621 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
COPAP53621 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COPAP53621 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
COPAP53621 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
COPAP53621 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.59□□□□□ -1.51
COPAP53621 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.59□□□□□ -1.51
COPAP53621 AC092681.1-201ENST00000297369 291 ntBASIC5.59□□□□□ -1.51
COPAP53621 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
COPAP53621 MIR320B1-201ENST00000390209 79 ntBASIC5.59□□□□□ -1.51
COPAP53621 RNU6-932P-201ENST00000391108 106 ntBASIC5.59□□□□□ -1.51
COPAP53621 U3.28-201ENST00000391249 210 ntBASIC5.59□□□□□ -1.51
COPAP53621 DNAJC19P6-201ENST00000401853 280 ntBASIC5.59□□□□□ -1.51
COPAP53621 HMGB3P18-201ENST00000406327 590 ntBASIC5.59□□□□□ -1.51
COPAP53621 OR51B3P-201ENST00000412287 913 ntBASIC5.59□□□□□ -1.51
COPAP53621 PCNPP4-201ENST00000414817 517 ntBASIC5.59□□□□□ -1.51
COPAP53621 HMGN2P27-201ENST00000427352 270 ntBASIC5.59□□□□□ -1.51
COPAP53621 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.59□□□□□ -1.51
COPAP53621 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COPAP53621 CYCSP11-201ENST00000436426 315 ntBASIC5.59□□□□□ -1.51
COPAP53621 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.59□□□□□ -1.51
COPAP53621 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.59□□□□□ -1.51
COPAP53621 CASP3P1-201ENST00000446037 609 ntBASIC5.59□□□□□ -1.51
COPAP53621 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
COPAP53621 EIF2S2P2-201ENST00000447161 982 ntBASIC5.59□□□□□ -1.51
COPAP53621 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms