Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.16□□□□□ -1.74
USF1P22415 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.16□□□□□ -1.74
USF1P22415 NIFKP7-201ENST00000503365 834 ntBASIC4.16□□□□□ -1.74
USF1P22415 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.16□□□□□ -1.74
USF1P22415 HPRT1P1-201ENST00000509498 657 ntBASIC4.16□□□□□ -1.74
USF1P22415 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.16□□□□□ -1.74
USF1P22415 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.16□□□□□ -1.74
USF1P22415 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.16□□□□□ -1.74
USF1P22415 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.16□□□□□ -1.74
USF1P22415 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.16□□□□□ -1.74
USF1P22415 AC005377.1-201ENST00000605126 456 ntBASIC4.16□□□□□ -1.74
USF1P22415 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.16□□□□□ -1.74
USF1P22415 AP005432.2-201ENST00000608162 586 ntBASIC4.16□□□□□ -1.74
USF1P22415 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.16□□□□□ -1.74
USF1P22415 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.16□□□□□ -1.74
USF1P22415 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
USF1P22415 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.16□□□□□ -1.74
USF1P22415 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.16□□□□□ -1.74
USF1P22415 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
USF1P22415 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
USF1P22415 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.16□□□□□ -1.74
USF1P22415 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
USF1P22415 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.16□□□□□ -1.74
USF1P22415 MAPK10-320ENST00000641462 6696 ntBASIC4.16□□□□□ -1.74
USF1P22415 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
USF1P22415 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
USF1P22415 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
USF1P22415 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
USF1P22415 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.15□□□□□ -1.74
USF1P22415 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
USF1P22415 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
USF1P22415 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
USF1P22415 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
USF1P22415 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
USF1P22415 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
USF1P22415 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
USF1P22415 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
USF1P22415 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.15□□□□□ -1.75
USF1P22415 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
USF1P22415 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
USF1P22415 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
USF1P22415 MIR365B-201ENST00000362317 111 ntBASIC4.15□□□□□ -1.75
USF1P22415 RNA5SP191-201ENST00000362585 102 ntBASIC4.15□□□□□ -1.75
USF1P22415 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
USF1P22415 SNORA68.2-201ENST00000391263 128 ntBASIC4.15□□□□□ -1.75
USF1P22415 RPS3AP23-201ENST00000401762 784 ntBASIC4.15□□□□□ -1.75
USF1P22415 RN7SKP100-201ENST00000411258 284 ntBASIC4.15□□□□□ -1.75
USF1P22415 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.15□□□□□ -1.75
USF1P22415 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
USF1P22415 RN7SL385P-201ENST00000468873 276 ntBASIC4.15□□□□□ -1.75
USF1P22415 SEPT7P6-201ENST00000469999 1143 ntBASIC4.15□□□□□ -1.75
USF1P22415 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.15□□□□□ -1.75
USF1P22415 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.15□□□□□ -1.75
USF1P22415 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.15□□□□□ -1.75
USF1P22415 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.15□□□□□ -1.75
USF1P22415 C1GALT1P3-201ENST00000522049 819 ntBASIC4.15□□□□□ -1.75
USF1P22415 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.15□□□□□ -1.75
USF1P22415 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.15□□□□□ -1.75
USF1P22415 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.15□□□□□ -1.75
USF1P22415 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.15□□□□□ -1.75
USF1P22415 MIR4284-201ENST00000578924 81 ntBASIC4.15□□□□□ -1.75
USF1P22415 AC068790.4-201ENST00000602474 263 ntBASIC4.15□□□□□ -1.75
USF1P22415 AC020910.3-201ENST00000603701 874 ntBASIC4.15□□□□□ -1.75
USF1P22415 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.15□□□□□ -1.75
USF1P22415 AC108359.1-201ENST00000616451 1211 ntBASIC4.15□□□□□ -1.75
USF1P22415 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.15□□□□□ -1.75
USF1P22415 AC019206.1-201ENST00000621938 425 ntBASIC4.15□□□□□ -1.75
USF1P22415 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
USF1P22415 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.15□□□□□ -1.75
USF1P22415 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.15□□□□□ -1.75
USF1P22415 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
USF1P22415 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.15□□□□□ -1.75
USF1P22415 AC139713.2-215ENST00000641428 5037 ntBASIC4.15□□□□□ -1.75
USF1P22415 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.15□□□□□ -1.75
USF1P22415 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.15□□□□□ -1.75
USF1P22415 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.75
USF1P22415 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.75
USF1P22415 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
USF1P22415 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
USF1P22415 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
USF1P22415 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
USF1P22415 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.14□□□□□ -1.75
USF1P22415 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
USF1P22415 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
USF1P22415 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
USF1P22415 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
USF1P22415 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.14□□□□□ -1.75
USF1P22415 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
USF1P22415 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
USF1P22415 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
USF1P22415 AC063976.2-201ENST00000425667 3556 ntBASIC4.14□□□□□ -1.75
USF1P22415 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
USF1P22415 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
USF1P22415 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
USF1P22415 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
USF1P22415 GLULP6-201ENST00000399502 913 ntBASIC4.14□□□□□ -1.75
USF1P22415 SNORA77-201ENST00000408716 125 ntBASIC4.14□□□□□ -1.75
USF1P22415 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
USF1P22415 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.14□□□□□ -1.75
USF1P22415 MTND4LP13-201ENST00000425022 298 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms