Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 BNIP3P7-201ENST00000605641 516 ntBASIC4.76□□□□□ -1.65
XRCC1P18887 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.76□□□□□ -1.65
XRCC1P18887 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
XRCC1P18887 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
XRCC1P18887 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.76□□□□□ -1.65
XRCC1P18887 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
XRCC1P18887 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
XRCC1P18887 DHX9P1-201ENST00000436565 3076 ntBASIC4.76□□□□□ -1.65
XRCC1P18887 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
XRCC1P18887 AC108751.5-201ENST00000492880 1336 ntBASIC4.75□□□□□ -1.65
XRCC1P18887 DDX18P5-201ENST00000534547 1306 ntBASIC4.75□□□□□ -1.65
XRCC1P18887 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
XRCC1P18887 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
XRCC1P18887 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.75□□□□□ -1.65
XRCC1P18887 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
XRCC1P18887 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
XRCC1P18887 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
XRCC1P18887 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
XRCC1P18887 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
XRCC1P18887 RNU1-83P-201ENST00000363426 164 ntBASIC4.75□□□□□ -1.65
XRCC1P18887 RNVU1-6-201ENST00000364688 164 ntBASIC4.75□□□□□ -1.65
XRCC1P18887 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
XRCC1P18887 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
XRCC1P18887 MIR137-201ENST00000385223 102 ntBASIC4.75□□□□□ -1.65
XRCC1P18887 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
XRCC1P18887 RN7SKP100-201ENST00000411258 284 ntBASIC4.75□□□□□ -1.65
XRCC1P18887 TBCAP2-201ENST00000416175 326 ntBASIC4.75□□□□□ -1.65
XRCC1P18887 ARAFP1-201ENST00000422172 605 ntBASIC4.75□□□□□ -1.65
XRCC1P18887 RGS17P1-201ENST00000423358 553 ntBASIC4.75□□□□□ -1.65
XRCC1P18887 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.75□□□□□ -1.65
XRCC1P18887 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.75□□□□□ -1.65
XRCC1P18887 NRBF2P3-201ENST00000432731 865 ntBASIC4.75□□□□□ -1.65
XRCC1P18887 AC000111.2-201ENST00000448200 210 ntBASIC4.75□□□□□ -1.65
XRCC1P18887 AC105918.1-201ENST00000474399 838 ntBASIC4.75□□□□□ -1.65
XRCC1P18887 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.75□□□□□ -1.65
XRCC1P18887 AC007686.1-201ENST00000488511 463 ntBASIC4.75□□□□□ -1.65
XRCC1P18887 DEFB109F-201ENST00000491870 277 ntBASIC4.75□□□□□ -1.65
XRCC1P18887 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.75□□□□□ -1.65
XRCC1P18887 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.75□□□□□ -1.65
XRCC1P18887 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.75□□□□□ -1.65
XRCC1P18887 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.75□□□□□ -1.65
XRCC1P18887 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.75□□□□□ -1.65
XRCC1P18887 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.75□□□□□ -1.65
XRCC1P18887 MIR4270-201ENST00000581799 70 ntBASIC4.75□□□□□ -1.65
XRCC1P18887 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.75□□□□□ -1.65
XRCC1P18887 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.75□□□□□ -1.65
XRCC1P18887 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.75□□□□□ -1.65
XRCC1P18887 AL512782.1-201ENST00000603093 364 ntBASIC4.75□□□□□ -1.65
XRCC1P18887 uc_338.18-201ENST00000615451 175 ntBASIC4.75□□□□□ -1.65
XRCC1P18887 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
XRCC1P18887 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
XRCC1P18887 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
XRCC1P18887 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
XRCC1P18887 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
XRCC1P18887 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
XRCC1P18887 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
XRCC1P18887 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
XRCC1P18887 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.74□□□□□ -1.65
XRCC1P18887 AC008758.3-201ENST00000507003 1829 ntBASIC4.74□□□□□ -1.65
XRCC1P18887 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
XRCC1P18887 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.74□□□□□ -1.65
XRCC1P18887 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
XRCC1P18887 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
XRCC1P18887 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
XRCC1P18887 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
XRCC1P18887 RNA5SP191-201ENST00000362585 102 ntBASIC4.74□□□□□ -1.65
XRCC1P18887 RNU6-819P-201ENST00000364116 107 ntBASIC4.74□□□□□ -1.65
XRCC1P18887 RNU6-729P-201ENST00000384399 107 ntBASIC4.74□□□□□ -1.65
XRCC1P18887 AL357515.1-201ENST00000402967 542 ntBASIC4.74□□□□□ -1.65
XRCC1P18887 AL139039.2-201ENST00000407436 479 ntBASIC4.74□□□□□ -1.65
XRCC1P18887 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.74□□□□□ -1.65
XRCC1P18887 TRIM60P17-201ENST00000415181 719 ntBASIC4.74□□□□□ -1.65
XRCC1P18887 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.74□□□□□ -1.65
XRCC1P18887 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.74□□□□□ -1.65
XRCC1P18887 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.74□□□□□ -1.65
XRCC1P18887 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.74□□□□□ -1.65
XRCC1P18887 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.74□□□□□ -1.65
XRCC1P18887 AC092447.2-201ENST00000435487 669 ntBASIC4.74□□□□□ -1.65
XRCC1P18887 AL450263.2-201ENST00000439400 589 ntBASIC4.74□□□□□ -1.65
XRCC1P18887 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.74□□□□□ -1.65
XRCC1P18887 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.74□□□□□ -1.65
XRCC1P18887 RPS5P7-201ENST00000456664 608 ntBASIC4.74□□□□□ -1.65
XRCC1P18887 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.74□□□□□ -1.65
XRCC1P18887 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.74□□□□□ -1.65
XRCC1P18887 RPS27AP18-201ENST00000515536 459 ntBASIC4.74□□□□□ -1.65
XRCC1P18887 SNORA70.17-201ENST00000516449 133 ntBASIC4.74□□□□□ -1.65
XRCC1P18887 HMGB1P19-201ENST00000517578 577 ntBASIC4.74□□□□□ -1.65
XRCC1P18887 BUD31P1-201ENST00000521828 359 ntBASIC4.74□□□□□ -1.65
XRCC1P18887 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.74□□□□□ -1.65
XRCC1P18887 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.74□□□□□ -1.65
XRCC1P18887 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.74□□□□□ -1.65
XRCC1P18887 AC063949.1-201ENST00000552900 865 ntBASIC4.74□□□□□ -1.65
XRCC1P18887 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.74□□□□□ -1.65
XRCC1P18887 SNORD39.2-201ENST00000579995 76 ntBASIC4.74□□□□□ -1.65
XRCC1P18887 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.74□□□□□ -1.65
XRCC1P18887 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
XRCC1P18887 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
XRCC1P18887 AL121890.2-201ENST00000617644 465 ntBASIC4.74□□□□□ -1.65
XRCC1P18887 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.74□□□□□ -1.65
XRCC1P18887 AC093775.1-201ENST00000624154 1868 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms