Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 MIR7109-201ENST00000613748 65 ntBASIC6.96□□□□□ -1.3
LIG1P18858 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
LIG1P18858 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
LIG1P18858 AC073592.6-201ENST00000624271 415 ntBASIC6.96□□□□□ -1.3
LIG1P18858 PCMTD1P7-201ENST00000634506 357 ntBASIC6.96□□□□□ -1.3
LIG1P18858 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.96□□□□□ -1.3
LIG1P18858 CASC19-264ENST00000641912 1184 ntBASIC6.96□□□□□ -1.3
LIG1P18858 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
LIG1P18858 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
LIG1P18858 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
LIG1P18858 AC005539.1-201ENST00000443768 1479 ntBASIC6.96□□□□□ -1.3
LIG1P18858 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
LIG1P18858 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
LIG1P18858 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.96□□□□□ -1.3
LIG1P18858 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.3
LIG1P18858 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
LIG1P18858 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
LIG1P18858 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
LIG1P18858 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
LIG1P18858 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.96□□□□□ -1.3
LIG1P18858 AC138907.8-201ENST00000623981 2256 ntBASIC6.96□□□□□ -1.3
LIG1P18858 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
LIG1P18858 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
LIG1P18858 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
LIG1P18858 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.95□□□□□ -1.3
LIG1P18858 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.95□□□□□ -1.3
LIG1P18858 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
LIG1P18858 AL121657.1-201ENST00000327215 531 ntBASIC6.95□□□□□ -1.3
LIG1P18858 OR4G2P-201ENST00000328113 903 ntBASIC6.95□□□□□ -1.3
LIG1P18858 RNA5SP375-201ENST00000362975 119 ntBASIC6.95□□□□□ -1.3
LIG1P18858 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
LIG1P18858 SNORA75-201ENST00000384158 137 ntBASIC6.95□□□□□ -1.3
LIG1P18858 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.95□□□□□ -1.3
LIG1P18858 RPS27AP11-201ENST00000402798 447 ntBASIC6.95□□□□□ -1.3
LIG1P18858 MIR548F1-201ENST00000408667 84 ntBASIC6.95□□□□□ -1.3
LIG1P18858 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.95□□□□□ -1.3
LIG1P18858 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.95□□□□□ -1.3
LIG1P18858 MTND1P2-201ENST00000430604 821 ntBASIC6.95□□□□□ -1.3
LIG1P18858 PSMD10P2-201ENST00000432890 672 ntBASIC6.95□□□□□ -1.3
LIG1P18858 AC094019.1-201ENST00000434678 472 ntBASIC6.95□□□□□ -1.3
LIG1P18858 AC092170.1-201ENST00000440211 356 ntBASIC6.95□□□□□ -1.3
LIG1P18858 AL137845.2-201ENST00000444292 988 ntBASIC6.95□□□□□ -1.3
LIG1P18858 TPT1P7-201ENST00000458300 517 ntBASIC6.95□□□□□ -1.3
LIG1P18858 AC107398.1-201ENST00000486904 505 ntBASIC6.95□□□□□ -1.3
LIG1P18858 RPL12P30-201ENST00000488389 499 ntBASIC6.95□□□□□ -1.3
LIG1P18858 PDCL3P4-201ENST00000489621 720 ntBASIC6.95□□□□□ -1.3
LIG1P18858 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.95□□□□□ -1.3
LIG1P18858 AC122718.2-201ENST00000505325 591 ntBASIC6.95□□□□□ -1.3
LIG1P18858 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.95□□□□□ -1.3
LIG1P18858 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.95□□□□□ -1.3
LIG1P18858 HSPE1P23-201ENST00000509838 286 ntBASIC6.95□□□□□ -1.3
LIG1P18858 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.95□□□□□ -1.3
LIG1P18858 MAST4-IT1-201ENST00000514241 658 ntBASIC6.95□□□□□ -1.3
LIG1P18858 AP000859.1-201ENST00000525536 307 ntBASIC6.95□□□□□ -1.3
LIG1P18858 AP003392.2-201ENST00000527269 208 ntBASIC6.95□□□□□ -1.3
LIG1P18858 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.95□□□□□ -1.3
LIG1P18858 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
LIG1P18858 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.95□□□□□ -1.3
LIG1P18858 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC6.95□□□□□ -1.3
LIG1P18858 AC084757.1-201ENST00000559987 490 ntBASIC6.95□□□□□ -1.3
LIG1P18858 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC6.95□□□□□ -1.3
LIG1P18858 AC008507.1-201ENST00000587506 734 ntBASIC6.95□□□□□ -1.3
LIG1P18858 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.95□□□□□ -1.3
LIG1P18858 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC6.95□□□□□ -1.3
LIG1P18858 AC009237.13-201ENST00000603193 276 ntBASIC6.95□□□□□ -1.3
LIG1P18858 AC141002.1-201ENST00000607025 279 ntBASIC6.95□□□□□ -1.3
LIG1P18858 AC004067.1-201ENST00000608733 700 ntBASIC6.95□□□□□ -1.3
LIG1P18858 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.95□□□□□ -1.3
LIG1P18858 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.95□□□□□ -1.3
LIG1P18858 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
LIG1P18858 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
LIG1P18858 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
LIG1P18858 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
LIG1P18858 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
LIG1P18858 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
LIG1P18858 EIF3EP1-201ENST00000433978 1316 ntBASIC6.95□□□□□ -1.3
LIG1P18858 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
LIG1P18858 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.95□□□□□ -1.3
LIG1P18858 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
LIG1P18858 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.95□□□□□ -1.3
LIG1P18858 PDZK1P1-202ENST00000425209 1350 ntBASIC6.95□□□□□ -1.3
LIG1P18858 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC6.95□□□□□ -1.3
LIG1P18858 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.94□□□□□ -1.3
LIG1P18858 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.94□□□□□ -1.3
LIG1P18858 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
LIG1P18858 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.94□□□□□ -1.3
LIG1P18858 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
LIG1P18858 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
LIG1P18858 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
LIG1P18858 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
LIG1P18858 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
LIG1P18858 AC005224.3-201ENST00000584683 2140 ntBASIC6.94□□□□□ -1.3
LIG1P18858 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
LIG1P18858 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.94□□□□□ -1.3
LIG1P18858 AC016583.1-201ENST00000624221 2431 ntBASIC6.94□□□□□ -1.3
LIG1P18858 AC016716.1-201ENST00000265882 708 ntBASIC6.94□□□□□ -1.3
LIG1P18858 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
LIG1P18858 SNORD1C-201ENST00000363315 78 ntBASIC6.94□□□□□ -1.3
LIG1P18858 RNA5SP346-201ENST00000363541 121 ntBASIC6.94□□□□□ -1.3
LIG1P18858 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms