Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 RNA5SP52-201ENST00000362448 134 ntBASIC5.11□□□□□ -1.59
TPM1P09493 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
TPM1P09493 RNU6-178P-201ENST00000384631 104 ntBASIC5.11□□□□□ -1.59
TPM1P09493 AC009302.1-201ENST00000417147 390 ntBASIC5.11□□□□□ -1.59
TPM1P09493 AC073136.2-201ENST00000417282 849 ntBASIC5.11□□□□□ -1.59
TPM1P09493 RPL21P43-201ENST00000425440 472 ntBASIC5.11□□□□□ -1.59
TPM1P09493 RN7SL172P-201ENST00000460535 303 ntBASIC5.11□□□□□ -1.59
TPM1P09493 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.11□□□□□ -1.59
TPM1P09493 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TPM1P09493 VWA8P1-201ENST00000510889 176 ntBASIC5.11□□□□□ -1.59
TPM1P09493 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.11□□□□□ -1.59
TPM1P09493 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.11□□□□□ -1.59
TPM1P09493 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.11□□□□□ -1.59
TPM1P09493 AC234775.3-201ENST00000564612 656 ntBASIC5.11□□□□□ -1.59
TPM1P09493 RN7SL802P-201ENST00000577858 299 ntBASIC5.11□□□□□ -1.59
TPM1P09493 MIR5699-201ENST00000578903 90 ntBASIC5.11□□□□□ -1.59
TPM1P09493 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.11□□□□□ -1.59
TPM1P09493 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.11□□□□□ -1.59
TPM1P09493 AC073137.1-201ENST00000605636 634 ntBASIC5.11□□□□□ -1.59
TPM1P09493 AC093799.2-201ENST00000610062 578 ntBASIC5.11□□□□□ -1.59
TPM1P09493 AC007497.1-201ENST00000610421 561 ntBASIC5.11□□□□□ -1.59
TPM1P09493 EIF3FP1-201ENST00000613970 806 ntBASIC5.11□□□□□ -1.59
TPM1P09493 AC023509.5-201ENST00000617434 807 ntBASIC5.11□□□□□ -1.59
TPM1P09493 AC015908.5-201ENST00000623289 343 ntBASIC5.11□□□□□ -1.59
TPM1P09493 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.11□□□□□ -1.59
TPM1P09493 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.11□□□□□ -1.59
TPM1P09493 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
TPM1P09493 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
TPM1P09493 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
TPM1P09493 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
TPM1P09493 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
TPM1P09493 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
TPM1P09493 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
TPM1P09493 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
TPM1P09493 RN7SKP162-201ENST00000363605 345 ntBASIC5.1□□□□□ -1.59
TPM1P09493 MIR93-201ENST00000385024 80 ntBASIC5.1□□□□□ -1.59
TPM1P09493 MIR223-201ENST00000385204 110 ntBASIC5.1□□□□□ -1.59
TPM1P09493 AL645733.1-201ENST00000402250 217 ntBASIC5.1□□□□□ -1.59
TPM1P09493 AC004552.1-201ENST00000419089 348 ntBASIC5.1□□□□□ -1.59
TPM1P09493 GLUD1P9-201ENST00000420997 1173 ntBASIC5.1□□□□□ -1.59
TPM1P09493 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.1□□□□□ -1.59
TPM1P09493 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.1□□□□□ -1.59
TPM1P09493 CCDC75P1-201ENST00000469247 791 ntBASIC5.1□□□□□ -1.59
TPM1P09493 RPS26P3-201ENST00000470205 348 ntBASIC5.1□□□□□ -1.59
TPM1P09493 AC090543.2-201ENST00000483963 348 ntBASIC5.1□□□□□ -1.59
TPM1P09493 AC004057.1-201ENST00000485827 348 ntBASIC5.1□□□□□ -1.59
TPM1P09493 AC098799.3-201ENST00000506095 438 ntBASIC5.1□□□□□ -1.59
TPM1P09493 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.1□□□□□ -1.59
TPM1P09493 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TPM1P09493 AC008694.2-201ENST00000517591 306 ntBASIC5.1□□□□□ -1.59
TPM1P09493 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TPM1P09493 IGKV2-18-201ENST00000522607 343 ntBASIC5.1□□□□□ -1.59
TPM1P09493 AC022832.1-201ENST00000530718 645 ntBASIC5.1□□□□□ -1.59
TPM1P09493 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TPM1P09493 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TPM1P09493 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.1□□□□□ -1.59
TPM1P09493 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.1□□□□□ -1.59
TPM1P09493 AC022726.1-201ENST00000587475 207 ntBASIC5.1□□□□□ -1.59
TPM1P09493 AC004241.3-201ENST00000611728 517 ntBASIC5.1□□□□□ -1.59
TPM1P09493 MIR6861-201ENST00000618657 64 ntBASIC5.1□□□□□ -1.59
TPM1P09493 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.1□□□□□ -1.59
TPM1P09493 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
TPM1P09493 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.1□□□□□ -1.59
TPM1P09493 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TPM1P09493 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TPM1P09493 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
TPM1P09493 AC068254.2-201ENST00000623938 3577 ntBASIC5.1□□□□□ -1.59
TPM1P09493 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
TPM1P09493 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
TPM1P09493 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
TPM1P09493 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.09□□□□□ -1.59
TPM1P09493 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TPM1P09493 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
TPM1P09493 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TPM1P09493 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC5.09□□□□□ -1.59
TPM1P09493 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TPM1P09493 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.09□□□□□ -1.59
TPM1P09493 METTL5-202ENST00000308099 629 ntTSL 3 BASIC5.09□□□□□ -1.59
TPM1P09493 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TPM1P09493 GCNT6-201ENST00000379591 934 ntBASIC5.09□□□□□ -1.59
TPM1P09493 MIR708-201ENST00000390708 88 ntBASIC5.09□□□□□ -1.59
TPM1P09493 RNU1-82P-201ENST00000390851 165 ntBASIC5.09□□□□□ -1.59
TPM1P09493 MIR1282-201ENST00000408865 101 ntBASIC5.09□□□□□ -1.59
TPM1P09493 AP000534.2-201ENST00000412729 568 ntBASIC5.09□□□□□ -1.59
TPM1P09493 GJA6P-201ENST00000415117 1042 ntBASIC5.09□□□□□ -1.59
TPM1P09493 RPL12P43-201ENST00000420608 499 ntBASIC5.09□□□□□ -1.59
TPM1P09493 RHOT1P3-201ENST00000436571 331 ntBASIC5.09□□□□□ -1.59
TPM1P09493 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.09□□□□□ -1.59
TPM1P09493 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.09□□□□□ -1.59
TPM1P09493 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.09□□□□□ -1.59
TPM1P09493 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.09□□□□□ -1.59
TPM1P09493 AL121877.1-201ENST00000453704 622 ntBASIC5.09□□□□□ -1.59
TPM1P09493 AC072052.1-201ENST00000496556 306 ntBASIC5.09□□□□□ -1.59
TPM1P09493 AC006499.6-201ENST00000511169 607 ntBASIC5.09□□□□□ -1.59
TPM1P09493 AC004980.4-201ENST00000513375 203 ntBASIC5.09□□□□□ -1.59
TPM1P09493 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TPM1P09493 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.09□□□□□ -1.59
TPM1P09493 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.09□□□□□ -1.59
TPM1P09493 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.09□□□□□ -1.59
TPM1P09493 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms