Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.34□□□□□ -1.55
COL2A1P02458 MFSD8-242ENST00000641690 4199 ntBASIC5.34□□□□□ -1.55
COL2A1P02458 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
COL2A1P02458 AP000432.2-201ENST00000624164 2048 ntBASIC5.34□□□□□ -1.55
COL2A1P02458 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL2A1P02458 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL2A1P02458 AC123912.3-201ENST00000600907 1367 ntBASIC5.34□□□□□ -1.55
COL2A1P02458 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.34□□□□□ -1.56
COL2A1P02458 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
COL2A1P02458 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.34□□□□□ -1.56
COL2A1P02458 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.34□□□□□ -1.56
COL2A1P02458 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
COL2A1P02458 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
COL2A1P02458 CEACAMP8-201ENST00000413902 580 ntBASIC5.33□□□□□ -1.56
COL2A1P02458 MRPS21P3-201ENST00000436696 262 ntBASIC5.33□□□□□ -1.56
COL2A1P02458 TCEA1P3-201ENST00000443005 880 ntBASIC5.33□□□□□ -1.56
COL2A1P02458 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.33□□□□□ -1.56
COL2A1P02458 PPP1R11P1-201ENST00000486095 376 ntBASIC5.33□□□□□ -1.56
COL2A1P02458 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.33□□□□□ -1.56
COL2A1P02458 AC010476.1-201ENST00000519111 851 ntBASIC5.33□□□□□ -1.56
COL2A1P02458 AC087477.6-201ENST00000559595 843 ntBASIC5.33□□□□□ -1.56
COL2A1P02458 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.33□□□□□ -1.56
COL2A1P02458 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL2A1P02458 AC090181.2-201ENST00000602975 672 ntBASIC5.33□□□□□ -1.56
COL2A1P02458 AC020634.1-201ENST00000608701 549 ntBASIC5.33□□□□□ -1.56
COL2A1P02458 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.33□□□□□ -1.56
COL2A1P02458 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.33□□□□□ -1.56
COL2A1P02458 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.33□□□□□ -1.56
COL2A1P02458 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL2A1P02458 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL2A1P02458 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.33□□□□□ -1.56
COL2A1P02458 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.33□□□□□ -1.56
COL2A1P02458 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.33□□□□□ -1.56
COL2A1P02458 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL2A1P02458 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.33□□□□□ -1.56
COL2A1P02458 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.33□□□□□ -1.56
COL2A1P02458 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
COL2A1P02458 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.33□□□□□ -1.56
COL2A1P02458 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL2A1P02458 RNA5SP366-201ENST00000365454 123 ntBASIC5.32□□□□□ -1.56
COL2A1P02458 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.32□□□□□ -1.56
COL2A1P02458 AC011933.1-201ENST00000413334 321 ntBASIC5.32□□□□□ -1.56
COL2A1P02458 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL2A1P02458 Z74021.1-201ENST00000423610 407 ntBASIC5.32□□□□□ -1.56
COL2A1P02458 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.32□□□□□ -1.56
COL2A1P02458 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.32□□□□□ -1.56
COL2A1P02458 CYCSP34-201ENST00000458172 304 ntBASIC5.32□□□□□ -1.56
COL2A1P02458 AC116533.1-201ENST00000459748 321 ntBASIC5.32□□□□□ -1.56
COL2A1P02458 AC106806.2-201ENST00000509365 500 ntBASIC5.32□□□□□ -1.56
COL2A1P02458 MRPL49P2-201ENST00000521066 465 ntBASIC5.32□□□□□ -1.56
COL2A1P02458 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.32□□□□□ -1.56
COL2A1P02458 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.32□□□□□ -1.56
COL2A1P02458 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.32□□□□□ -1.56
COL2A1P02458 MIR3158-1-201ENST00000583596 81 ntBASIC5.32□□□□□ -1.56
COL2A1P02458 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.32□□□□□ -1.56
COL2A1P02458 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC5.32□□□□□ -1.56
COL2A1P02458 AC130352.1-201ENST00000602979 661 ntBASIC5.32□□□□□ -1.56
COL2A1P02458 AC113403.1-201ENST00000604910 193 ntBASIC5.32□□□□□ -1.56
COL2A1P02458 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.32□□□□□ -1.56
COL2A1P02458 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.32□□□□□ -1.56
COL2A1P02458 AC140479.6-201ENST00000633535 357 ntBASIC5.32□□□□□ -1.56
COL2A1P02458 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL2A1P02458 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL2A1P02458 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL2A1P02458 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL2A1P02458 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL2A1P02458 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL2A1P02458 AL136164.3-201ENST00000624429 3978 ntBASIC5.32□□□□□ -1.56
COL2A1P02458 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL2A1P02458 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL2A1P02458 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
COL2A1P02458 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL2A1P02458 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL2A1P02458 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL2A1P02458 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
COL2A1P02458 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.32□□□□□ -1.56
COL2A1P02458 SNORA11.1-201ENST00000408133 129 ntBASIC5.32□□□□□ -1.56
COL2A1P02458 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.32□□□□□ -1.56
COL2A1P02458 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.32□□□□□ -1.56
COL2A1P02458 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL2A1P02458 RPL23AP83-201ENST00000434984 473 ntBASIC5.32□□□□□ -1.56
COL2A1P02458 OR4C10P-201ENST00000434991 931 ntBASIC5.32□□□□□ -1.56
COL2A1P02458 PHBP16-201ENST00000446318 950 ntBASIC5.32□□□□□ -1.56
COL2A1P02458 AC114755.5-201ENST00000447760 831 ntBASIC5.32□□□□□ -1.56
COL2A1P02458 AL358232.1-201ENST00000448030 501 ntBASIC5.32□□□□□ -1.56
COL2A1P02458 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.32□□□□□ -1.56
COL2A1P02458 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.32□□□□□ -1.56
COL2A1P02458 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
COL2A1P02458 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.32□□□□□ -1.56
COL2A1P02458 AC092953.2-201ENST00000608000 699 ntBASIC5.32□□□□□ -1.56
COL2A1P02458 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC5.32□□□□□ -1.56
COL2A1P02458 RNA5SP196-201ENST00000625967 102 ntBASIC5.32□□□□□ -1.56
COL2A1P02458 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.32□□□□□ -1.56
COL2A1P02458 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL2A1P02458 MAPK10-286ENST00000641208 8747 ntBASIC5.32□□□□□ -1.56
COL2A1P02458 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COL2A1P02458 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL2A1P02458 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL2A1P02458 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
COL2A1P02458 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms