Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
MBD4O95243 AC008758.3-201ENST00000507003 1829 ntBASIC5.86□□□□□ -1.47
MBD4O95243 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.86□□□□□ -1.47
MBD4O95243 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
MBD4O95243 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
MBD4O95243 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
MBD4O95243 RNU6-225P-201ENST00000384613 103 ntBASIC5.86□□□□□ -1.47
MBD4O95243 MIR320B1-201ENST00000390209 79 ntBASIC5.86□□□□□ -1.47
MBD4O95243 RNA5SP113-201ENST00000410486 84 ntBASIC5.86□□□□□ -1.47
MBD4O95243 AC013429.2-201ENST00000418798 781 ntBASIC5.86□□□□□ -1.47
MBD4O95243 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.86□□□□□ -1.47
MBD4O95243 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.86□□□□□ -1.47
MBD4O95243 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.86□□□□□ -1.47
MBD4O95243 OR2B7P-201ENST00000429302 934 ntBASIC5.86□□□□□ -1.47
MBD4O95243 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.86□□□□□ -1.47
MBD4O95243 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.86□□□□□ -1.47
MBD4O95243 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.86□□□□□ -1.47
MBD4O95243 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.86□□□□□ -1.47
MBD4O95243 AURKAPS2-201ENST00000454983 333 ntBASIC5.86□□□□□ -1.47
MBD4O95243 AC021660.1-201ENST00000465006 554 ntBASIC5.86□□□□□ -1.47
MBD4O95243 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.86□□□□□ -1.47
MBD4O95243 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.86□□□□□ -1.47
MBD4O95243 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
MBD4O95243 AC068993.1-201ENST00000546724 589 ntBASIC5.86□□□□□ -1.47
MBD4O95243 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.86□□□□□ -1.47
MBD4O95243 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.86□□□□□ -1.47
MBD4O95243 AL049839.1-201ENST00000556151 657 ntBASIC5.86□□□□□ -1.47
MBD4O95243 CBX3P2-202ENST00000583365 535 ntBASIC5.86□□□□□ -1.47
MBD4O95243 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.86□□□□□ -1.47
MBD4O95243 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.86□□□□□ -1.47
MBD4O95243 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.86□□□□□ -1.47
MBD4O95243 KATNBL1P5-201ENST00000605015 517 ntBASIC5.86□□□□□ -1.47
MBD4O95243 AL022394.1-201ENST00000606979 292 ntBASIC5.86□□□□□ -1.47
MBD4O95243 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.86□□□□□ -1.47
MBD4O95243 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.86□□□□□ -1.47
MBD4O95243 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
MBD4O95243 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
MBD4O95243 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
MBD4O95243 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
MBD4O95243 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.85□□□□□ -1.47
MBD4O95243 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
MBD4O95243 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.85□□□□□ -1.47
MBD4O95243 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
MBD4O95243 RNA5SP345-201ENST00000410646 108 ntBASIC5.85□□□□□ -1.47
MBD4O95243 AC019070.1-201ENST00000415008 1024 ntBASIC5.85□□□□□ -1.47
MBD4O95243 AC017099.1-201ENST00000448261 1028 ntBASIC5.85□□□□□ -1.47
MBD4O95243 AC093166.2-201ENST00000455969 1017 ntBASIC5.85□□□□□ -1.47
MBD4O95243 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.85□□□□□ -1.47
MBD4O95243 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.85□□□□□ -1.47
MBD4O95243 MTND3P24-201ENST00000506306 329 ntBASIC5.85□□□□□ -1.47
MBD4O95243 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.85□□□□□ -1.47
MBD4O95243 AL671862.1-201ENST00000515851 349 ntBASIC5.85□□□□□ -1.47
MBD4O95243 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.85□□□□□ -1.47
MBD4O95243 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.85□□□□□ -1.47
MBD4O95243 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.85□□□□□ -1.47
MBD4O95243 AGGF1P9-201ENST00000561884 913 ntBASIC5.85□□□□□ -1.47
MBD4O95243 UBE2FP2-201ENST00000566646 462 ntBASIC5.85□□□□□ -1.47
MBD4O95243 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
MBD4O95243 AL450270.1-201ENST00000606160 391 ntBASIC5.85□□□□□ -1.47
MBD4O95243 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.85□□□□□ -1.47
MBD4O95243 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.85□□□□□ -1.47
MBD4O95243 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.85□□□□□ -1.47
MBD4O95243 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
MBD4O95243 ZNF90P1-201ENST00000480493 1951 ntBASIC5.85□□□□□ -1.47
MBD4O95243 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.85□□□□□ -1.47
MBD4O95243 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
MBD4O95243 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
MBD4O95243 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
MBD4O95243 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
MBD4O95243 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
MBD4O95243 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.84□□□□□ -1.47
MBD4O95243 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
MBD4O95243 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.84□□□□□ -1.47
MBD4O95243 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.84□□□□□ -1.47
MBD4O95243 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.84□□□□□ -1.47
MBD4O95243 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.84□□□□□ -1.47
MBD4O95243 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
MBD4O95243 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
MBD4O95243 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.84□□□□□ -1.47
MBD4O95243 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
MBD4O95243 RNU4-31P-201ENST00000384211 141 ntBASIC5.84□□□□□ -1.47
MBD4O95243 U3.30-201ENST00000391308 210 ntBASIC5.84□□□□□ -1.47
MBD4O95243 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
MBD4O95243 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
MBD4O95243 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
MBD4O95243 RNU2-72P-201ENST00000411175 163 ntBASIC5.84□□□□□ -1.47
MBD4O95243 RNU4-74P-201ENST00000411280 161 ntBASIC5.84□□□□□ -1.47
MBD4O95243 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.84□□□□□ -1.47
MBD4O95243 AC073508.1-201ENST00000428866 656 ntBASIC5.84□□□□□ -1.47
MBD4O95243 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.84□□□□□ -1.47
MBD4O95243 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.84□□□□□ -1.47
MBD4O95243 MRPL35P2-201ENST00000448009 511 ntBASIC5.84□□□□□ -1.47
MBD4O95243 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.84□□□□□ -1.47
MBD4O95243 snoU109.6-201ENST00000516831 118 ntBASIC5.84□□□□□ -1.47
MBD4O95243 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.84□□□□□ -1.47
MBD4O95243 MTND2P7-201ENST00000521337 640 ntBASIC5.84□□□□□ -1.47
MBD4O95243 AC004923.2-201ENST00000529649 369 ntBASIC5.84□□□□□ -1.47
MBD4O95243 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.84□□□□□ -1.47
MBD4O95243 AP001880.2-201ENST00000538233 448 ntBASIC5.84□□□□□ -1.47
MBD4O95243 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms