Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 MIR4302-201ENST00000638058 60 ntBASIC4.66□□□□□ -1.66
LSM1O15116 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
LSM1O15116 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
LSM1O15116 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
LSM1O15116 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LSM1O15116 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.66□□□□□ -1.66
LSM1O15116 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LSM1O15116 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LSM1O15116 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LSM1O15116 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LSM1O15116 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
LSM1O15116 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LSM1O15116 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
LSM1O15116 Z98755.1-201ENST00000407015 1384 ntBASIC4.65□□□□□ -1.66
LSM1O15116 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.65□□□□□ -1.66
LSM1O15116 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LSM1O15116 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
LSM1O15116 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
LSM1O15116 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LSM1O15116 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
LSM1O15116 RNA5SP513-201ENST00000364648 118 ntBASIC4.65□□□□□ -1.67
LSM1O15116 Z97832.1-201ENST00000402490 328 ntBASIC4.65□□□□□ -1.67
LSM1O15116 AL391361.1-201ENST00000405580 489 ntBASIC4.65□□□□□ -1.67
LSM1O15116 AL136131.1-201ENST00000406079 803 ntBASIC4.65□□□□□ -1.67
LSM1O15116 RNU2-50P-201ENST00000410494 143 ntBASIC4.65□□□□□ -1.67
LSM1O15116 RAC1P3-201ENST00000416129 580 ntBASIC4.65□□□□□ -1.67
LSM1O15116 MTND4LP13-201ENST00000425022 298 ntBASIC4.65□□□□□ -1.67
LSM1O15116 AL121578.1-201ENST00000428051 892 ntBASIC4.65□□□□□ -1.67
LSM1O15116 AC022022.1-201ENST00000430304 178 ntBASIC4.65□□□□□ -1.67
LSM1O15116 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.65□□□□□ -1.67
LSM1O15116 CNOT7P2-201ENST00000441051 832 ntBASIC4.65□□□□□ -1.67
LSM1O15116 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.65□□□□□ -1.67
LSM1O15116 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.65□□□□□ -1.67
LSM1O15116 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.65□□□□□ -1.67
LSM1O15116 BX284632.1-201ENST00000478218 541 ntBASIC4.65□□□□□ -1.67
LSM1O15116 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.65□□□□□ -1.67
LSM1O15116 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.65□□□□□ -1.67
LSM1O15116 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.65□□□□□ -1.67
LSM1O15116 MRPS33P2-201ENST00000507850 322 ntBASIC4.65□□□□□ -1.67
LSM1O15116 BUD31P1-201ENST00000521828 359 ntBASIC4.65□□□□□ -1.67
LSM1O15116 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
LSM1O15116 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.65□□□□□ -1.67
LSM1O15116 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.65□□□□□ -1.67
LSM1O15116 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.65□□□□□ -1.67
LSM1O15116 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.65□□□□□ -1.67
LSM1O15116 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.65□□□□□ -1.67
LSM1O15116 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
LSM1O15116 MEMO1P5-201ENST00000604810 406 ntBASIC4.65□□□□□ -1.67
LSM1O15116 AP000864.1-201ENST00000609424 650 ntBASIC4.65□□□□□ -1.67
LSM1O15116 NF1P10-201ENST00000613227 742 ntBASIC4.65□□□□□ -1.67
LSM1O15116 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.65□□□□□ -1.67
LSM1O15116 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.65□□□□□ -1.67
LSM1O15116 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.65□□□□□ -1.67
LSM1O15116 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
LSM1O15116 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
LSM1O15116 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LSM1O15116 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
LSM1O15116 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LSM1O15116 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
LSM1O15116 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LSM1O15116 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
LSM1O15116 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
LSM1O15116 AC011155.1-201ENST00000316512 456 ntBASIC4.64□□□□□ -1.67
LSM1O15116 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
LSM1O15116 MIR365B-201ENST00000362317 111 ntBASIC4.64□□□□□ -1.67
LSM1O15116 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.64□□□□□ -1.67
LSM1O15116 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LSM1O15116 AC093719.1-202ENST00000392735 373 ntBASIC4.64□□□□□ -1.67
LSM1O15116 AL021331.1-201ENST00000402817 582 ntBASIC4.64□□□□□ -1.67
LSM1O15116 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.64□□□□□ -1.67
LSM1O15116 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LSM1O15116 RPS27P18-201ENST00000431701 247 ntBASIC4.64□□□□□ -1.67
LSM1O15116 AL451139.1-201ENST00000434718 346 ntBASIC4.64□□□□□ -1.67
LSM1O15116 RPS26P2-201ENST00000440331 348 ntBASIC4.64□□□□□ -1.67
LSM1O15116 TDGF1P1-201ENST00000445734 527 ntBASIC4.64□□□□□ -1.67
LSM1O15116 AC104306.1-201ENST00000449702 371 ntBASIC4.64□□□□□ -1.67
LSM1O15116 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.64□□□□□ -1.67
LSM1O15116 RN7SL319P-201ENST00000480656 221 ntBASIC4.64□□□□□ -1.67
LSM1O15116 DEFB109F-201ENST00000491870 277 ntBASIC4.64□□□□□ -1.67
LSM1O15116 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LSM1O15116 OR51K1P-201ENST00000510214 950 ntBASIC4.64□□□□□ -1.67
LSM1O15116 AC090819.1-201ENST00000523800 1111 ntBASIC4.64□□□□□ -1.67
LSM1O15116 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.64□□□□□ -1.67
LSM1O15116 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LSM1O15116 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LSM1O15116 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.64□□□□□ -1.67
LSM1O15116 AC092490.3-201ENST00000545370 572 ntBASIC4.64□□□□□ -1.67
LSM1O15116 AC012146.2-201ENST00000576545 416 ntBASIC4.64□□□□□ -1.67
LSM1O15116 AC008536.1-201ENST00000602872 669 ntBASIC4.64□□□□□ -1.67
LSM1O15116 AC025946.2-201ENST00000603398 234 ntBASIC4.64□□□□□ -1.67
LSM1O15116 AC007620.3-201ENST00000608131 497 ntBASIC4.64□□□□□ -1.67
LSM1O15116 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.64□□□□□ -1.67
LSM1O15116 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.64□□□□□ -1.67
LSM1O15116 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.64□□□□□ -1.67
LSM1O15116 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.64□□□□□ -1.67
LSM1O15116 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
LSM1O15116 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.63□□□□□ -1.67
LSM1O15116 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LSM1O15116 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LSM1O15116 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms