Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.36□□□□□ -1.71
TRAPPC4Q9Y296 AC008676.3-201ENST00000521237 435 ntBASIC4.36□□□□□ -1.71
TRAPPC4Q9Y296 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.36□□□□□ -1.71
TRAPPC4Q9Y296 AC005000.1-201ENST00000536192 288 ntBASIC4.36□□□□□ -1.71
TRAPPC4Q9Y296 GCSHP4-201ENST00000538792 439 ntBASIC4.36□□□□□ -1.71
TRAPPC4Q9Y296 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.36□□□□□ -1.71
TRAPPC4Q9Y296 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.36□□□□□ -1.71
TRAPPC4Q9Y296 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.36□□□□□ -1.71
TRAPPC4Q9Y296 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
TRAPPC4Q9Y296 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.36□□□□□ -1.71
TRAPPC4Q9Y296 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.36□□□□□ -1.71
TRAPPC4Q9Y296 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.36□□□□□ -1.71
TRAPPC4Q9Y296 AC012414.7-202ENST00000622705 1090 ntBASIC4.36□□□□□ -1.71
TRAPPC4Q9Y296 AL672167.1-203ENST00000641299 2975 ntBASIC4.36□□□□□ -1.71
TRAPPC4Q9Y296 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
TRAPPC4Q9Y296 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRAPPC4Q9Y296 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRAPPC4Q9Y296 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
TRAPPC4Q9Y296 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.36□□□□□ -1.71
TRAPPC4Q9Y296 AC131971.1-201ENST00000332881 1482 ntBASIC4.36□□□□□ -1.71
TRAPPC4Q9Y296 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRAPPC4Q9Y296 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.36□□□□□ -1.71
TRAPPC4Q9Y296 MAPK10-303ENST00000641324 3959 ntBASIC4.36□□□□□ -1.71
TRAPPC4Q9Y296 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRAPPC4Q9Y296 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 MIR448-201ENST00000362131 111 ntBASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 RN7SKP149-201ENST00000363008 344 ntBASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 SNORA51.8-201ENST00000384234 132 ntBASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 VDAC2P1-201ENST00000399358 958 ntBASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 COX6B1P1-201ENST00000415962 213 ntBASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 LINC00993-201ENST00000420453 540 ntBASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 RPS17P8-201ENST00000434525 335 ntBASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 AC073648.4-201ENST00000442655 781 ntBASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 AL589765.3-201ENST00000446084 462 ntBASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 RPL31P44-201ENST00000447680 377 ntBASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 OR52J1P-201ENST00000450596 932 ntBASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 RBMY2TP-201ENST00000451162 947 ntBASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 AC234781.3-201ENST00000452540 973 ntBASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 AURKAPS2-201ENST00000454983 333 ntBASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 RPS5P7-201ENST00000456664 608 ntBASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 ZFRP1-201ENST00000457579 2970 ntBASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 RPS26P28-201ENST00000470806 348 ntBASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 NDUFB5P1-201ENST00000508134 564 ntBASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 SNORD116-30-201ENST00000516468 85 ntBASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 AC021006.3-201ENST00000530771 192 ntBASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 AC025423.2-201ENST00000537570 439 ntBASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 AL049839.1-201ENST00000556151 657 ntBASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 COX6CP4-201ENST00000605798 228 ntBASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 SNORA35B-201ENST00000607417 129 ntBASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 AL669942.2-201ENST00000620352 697 ntBASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 AC068254.2-201ENST00000623938 3577 ntBASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TRAPPC4Q9Y296 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.34□□□□□ -1.71
TRAPPC4Q9Y296 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.34□□□□□ -1.71
TRAPPC4Q9Y296 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.34□□□□□ -1.71
TRAPPC4Q9Y296 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.71
TRAPPC4Q9Y296 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRAPPC4Q9Y296 SNORA74A-201ENST00000364089 198 ntBASIC4.34□□□□□ -1.71
TRAPPC4Q9Y296 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
TRAPPC4Q9Y296 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
TRAPPC4Q9Y296 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
TRAPPC4Q9Y296 VN1R37P-201ENST00000419096 748 ntBASIC4.34□□□□□ -1.71
TRAPPC4Q9Y296 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.34□□□□□ -1.71
TRAPPC4Q9Y296 TPTE2P1-204ENST00000435256 593 ntBASIC4.34□□□□□ -1.71
TRAPPC4Q9Y296 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.34□□□□□ -1.71
TRAPPC4Q9Y296 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.34□□□□□ -1.71
TRAPPC4Q9Y296 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.34□□□□□ -1.71
TRAPPC4Q9Y296 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.34□□□□□ -1.71
TRAPPC4Q9Y296 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.34□□□□□ -1.71
TRAPPC4Q9Y296 ATP5G1P3-201ENST00000463301 410 ntBASIC4.34□□□□□ -1.71
TRAPPC4Q9Y296 RPL5P30-201ENST00000465511 891 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms