Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 AC007842.1-201ENST00000597336 2039 ntBASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 IL6STP1-201ENST00000346911 1020 ntBASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 AC023490.2-201ENST00000359859 470 ntBASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 SNORD116-9-201ENST00000384000 95 ntBASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 SNORD116-3-201ENST00000384287 95 ntBASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 SNORD116-7-201ENST00000384404 95 ntBASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 SNORD116-5-201ENST00000384462 95 ntBASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 AC087752.1-201ENST00000391360 558 ntBASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 AL450992.3-201ENST00000413192 568 ntBASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 AC004074.1-201ENST00000421810 1063 ntBASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 RPL7P44-201ENST00000424827 742 ntBASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 RPSAP65-201ENST00000429660 595 ntBASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 VN1R108P-201ENST00000431580 830 ntBASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 FTLP19-201ENST00000433300 394 ntBASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 CLUHP1-201ENST00000435012 1190 ntBASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 MTND2P40-201ENST00000436718 841 ntBASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 EEF1B2P5-201ENST00000444820 548 ntBASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 RPL12P39-201ENST00000455456 496 ntBASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 AC012123.2-201ENST00000485809 248 ntBASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 AP002453.1-201ENST00000492327 668 ntBASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 OR7E157P-201ENST00000494376 911 ntBASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 TRIM77BP-201ENST00000524985 1119 ntBASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 UBE2NP1-201ENST00000545592 458 ntBASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 AC004825.1-201ENST00000555068 586 ntBASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 OR4K7P-201ENST00000580232 945 ntBASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 AL163642.2-201ENST00000604722 1019 ntBASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 AL133481.2-203ENST00000607558 139 ntBASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 AC072039.2-201ENST00000608883 439 ntBASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 AC122108.2-201ENST00000611946 526 ntBASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 AL359757.1-201ENST00000623176 255 ntBASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 SLC10A5P1-201ENST00000379063 1306 ntBASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 AL445523.1-201ENST00000451184 1362 ntBASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCM2LQ9NUG4 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.65□□□□□ -1.5
CCM2LQ9NUG4 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.65□□□□□ -1.5
CCM2LQ9NUG4 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCM2LQ9NUG4 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CCM2LQ9NUG4 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CCM2LQ9NUG4 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
CCM2LQ9NUG4 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCM2LQ9NUG4 DBF4P1-201ENST00000412976 1892 ntBASIC5.65□□□□□ -1.5
CCM2LQ9NUG4 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCM2LQ9NUG4 OR56B2P-201ENST00000317102 954 ntBASIC5.65□□□□□ -1.5
CCM2LQ9NUG4 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCM2LQ9NUG4 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCM2LQ9NUG4 AL031985.1-201ENST00000392713 418 ntBASIC5.65□□□□□ -1.5
CCM2LQ9NUG4 AL161909.1-201ENST00000397390 712 ntBASIC5.65□□□□□ -1.5
CCM2LQ9NUG4 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.65□□□□□ -1.5
CCM2LQ9NUG4 SETP15-201ENST00000412724 337 ntBASIC5.65□□□□□ -1.5
CCM2LQ9NUG4 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.65□□□□□ -1.5
CCM2LQ9NUG4 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms