Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 USP24P1-201ENST00000433802 779 ntBASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 AC015983.1-201ENST00000441577 373 ntBASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 RNA5SP228-201ENST00000516232 133 ntBASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 AC078899.1-201ENST00000521432 1185 ntBASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 AP001804.1-201ENST00000526868 919 ntBASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 OR5D15P-201ENST00000531671 942 ntBASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 AC090424.1-201ENST00000535243 736 ntBASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 AC126615.2-201ENST00000553003 515 ntBASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 RBM22P12-201ENST00000567098 1255 ntBASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 AC006362.1-201ENST00000567392 174 ntBASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 MIR4260-201ENST00000583107 67 ntBASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 AF131215.7-201ENST00000602443 707 ntBASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 AL583832.1-201ENST00000603227 784 ntBASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 MTCO2P22-201ENST00000603246 681 ntBASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 CLPTM1LP1-201ENST00000604519 484 ntBASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 AL392112.1-201ENST00000605115 829 ntBASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 AC107075.1-201ENST00000613695 314 ntBASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 BANCR-201ENST00000624238 473 ntTSL 2 BASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 AC019226.1-201ENST00000625666 515 ntBASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 AC022164.1-201ENST00000568767 2673 ntBASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 MFSD8-239ENST00000641590 2479 ntBASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 MFSD8-219ENST00000641228 2559 ntBASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PDLIM7Q9NR12 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 RNA5SP319-201ENST00000362768 119 ntBASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 U8.4-201ENST00000363626 134 ntBASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 Y_RNA.553-201ENST00000384670 102 ntBASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 Y_RNA.560-201ENST00000384689 102 ntBASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 RNU6-1320P-201ENST00000390838 107 ntBASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 SNORA40.2-201ENST00000390847 128 ntBASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 RNU6-1269P-201ENST00000391139 107 ntBASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 AL357752.1-201ENST00000412817 349 ntBASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 RPS21P8-201ENST00000413365 247 ntBASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 AC093084.1-201ENST00000424233 687 ntBASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 AC012519.1-201ENST00000424588 610 ntBASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 RPL7L1P9-201ENST00000431298 745 ntBASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 HSD52-202ENST00000436225 772 ntTSL 3 BASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 CYCSP12-201ENST00000437729 300 ntBASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 RPS24P1-201ENST00000438550 371 ntBASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 AL772161.1-201ENST00000439130 476 ntBASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 AL450996.1-201ENST00000445574 1202 ntBASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 RNU6-599P-201ENST00000459383 107 ntBASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 RNU6-1193P-201ENST00000459461 107 ntBASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 RPL7P40-201ENST00000481703 745 ntBASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 AC073610.1-201ENST00000489971 396 ntBASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 AC113347.3-201ENST00000509113 148 ntBASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 RN7SKP141-201ENST00000516167 338 ntBASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 Y_RNA.695-201ENST00000516715 107 ntBASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 AC021678.3-201ENST00000517893 476 ntBASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC6.42□□□□□ -1.38
PDLIM7Q9NR12 AL121594.2-201ENST00000541658 472 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms