Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCSER1Q9C0I3 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCSER1Q9C0I3 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.28□□□□□ -1.56
CCSER1Q9C0I3 SETP15-201ENST00000412724 337 ntBASIC5.28□□□□□ -1.56
CCSER1Q9C0I3 AL139128.1-201ENST00000413921 941 ntBASIC5.28□□□□□ -1.56
CCSER1Q9C0I3 AL360081.1-201ENST00000428299 555 ntBASIC5.28□□□□□ -1.56
CCSER1Q9C0I3 USP9YP9-201ENST00000429406 715 ntBASIC5.28□□□□□ -1.56
CCSER1Q9C0I3 AC097523.2-201ENST00000435551 652 ntBASIC5.28□□□□□ -1.56
CCSER1Q9C0I3 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.28□□□□□ -1.56
CCSER1Q9C0I3 AC006466.1-201ENST00000438721 289 ntBASIC5.28□□□□□ -1.56
CCSER1Q9C0I3 AC108463.1-201ENST00000450258 347 ntBASIC5.28□□□□□ -1.56
CCSER1Q9C0I3 AC090142.1-201ENST00000465776 462 ntBASIC5.28□□□□□ -1.56
CCSER1Q9C0I3 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCSER1Q9C0I3 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.28□□□□□ -1.56
CCSER1Q9C0I3 IGKV1-32-201ENST00000519290 311 ntBASIC5.28□□□□□ -1.56
CCSER1Q9C0I3 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.28□□□□□ -1.56
CCSER1Q9C0I3 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.28□□□□□ -1.56
CCSER1Q9C0I3 AC084033.1-201ENST00000550830 633 ntBASIC5.28□□□□□ -1.56
CCSER1Q9C0I3 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.28□□□□□ -1.56
CCSER1Q9C0I3 AC209154.1-201ENST00000582156 337 ntBASIC5.28□□□□□ -1.56
CCSER1Q9C0I3 AL512782.1-201ENST00000603093 364 ntBASIC5.28□□□□□ -1.56
CCSER1Q9C0I3 AL135786.2-201ENST00000608422 615 ntBASIC5.28□□□□□ -1.56
CCSER1Q9C0I3 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.28□□□□□ -1.56
CCSER1Q9C0I3 AL590410.1-201ENST00000617925 333 ntBASIC5.28□□□□□ -1.56
CCSER1Q9C0I3 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.28□□□□□ -1.56
CCSER1Q9C0I3 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCSER1Q9C0I3 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CCSER1Q9C0I3 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCSER1Q9C0I3 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.28□□□□□ -1.56
CCSER1Q9C0I3 AC132825.1-201ENST00000463573 2247 ntBASIC5.27□□□□□ -1.57
CCSER1Q9C0I3 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CCSER1Q9C0I3 RNU4-44P-201ENST00000363050 141 ntBASIC5.27□□□□□ -1.57
CCSER1Q9C0I3 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCSER1Q9C0I3 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCSER1Q9C0I3 AL356317.1-201ENST00000396110 1436 ntBASIC5.27□□□□□ -1.57
CCSER1Q9C0I3 AC233289.1-201ENST00000403700 508 ntBASIC5.27□□□□□ -1.57
CCSER1Q9C0I3 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCSER1Q9C0I3 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.27□□□□□ -1.57
CCSER1Q9C0I3 BX510359.2-201ENST00000417920 305 ntBASIC5.27□□□□□ -1.57
CCSER1Q9C0I3 OR51A6P-201ENST00000418680 1004 ntBASIC5.27□□□□□ -1.57
CCSER1Q9C0I3 ARAFP1-201ENST00000422172 605 ntBASIC5.27□□□□□ -1.57
CCSER1Q9C0I3 MTND4LP13-201ENST00000425022 298 ntBASIC5.27□□□□□ -1.57
CCSER1Q9C0I3 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.27□□□□□ -1.57
CCSER1Q9C0I3 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.27□□□□□ -1.57
CCSER1Q9C0I3 AL049745.1-201ENST00000433953 286 ntBASIC5.27□□□□□ -1.57
CCSER1Q9C0I3 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.27□□□□□ -1.57
CCSER1Q9C0I3 AL772161.1-201ENST00000439130 476 ntBASIC5.27□□□□□ -1.57
CCSER1Q9C0I3 AL589765.3-201ENST00000446084 462 ntBASIC5.27□□□□□ -1.57
CCSER1Q9C0I3 AL591623.2-201ENST00000449978 222 ntBASIC5.27□□□□□ -1.57
CCSER1Q9C0I3 HSPE1P22-201ENST00000456856 327 ntBASIC5.27□□□□□ -1.57
CCSER1Q9C0I3 SEPT7P6-201ENST00000469999 1143 ntBASIC5.27□□□□□ -1.57
CCSER1Q9C0I3 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCSER1Q9C0I3 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCSER1Q9C0I3 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CCSER1Q9C0I3 AL110118.1-201ENST00000553543 400 ntBASIC5.27□□□□□ -1.57
CCSER1Q9C0I3 SETP1-201ENST00000556014 845 ntBASIC5.27□□□□□ -1.57
CCSER1Q9C0I3 RN7SL652P-201ENST00000577769 300 ntBASIC5.27□□□□□ -1.57
CCSER1Q9C0I3 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.27□□□□□ -1.57
CCSER1Q9C0I3 MIR4700-201ENST00000578311 74 ntBASIC5.27□□□□□ -1.57
CCSER1Q9C0I3 MIR3667-201ENST00000581025 74 ntBASIC5.27□□□□□ -1.57
CCSER1Q9C0I3 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.27□□□□□ -1.57
CCSER1Q9C0I3 AL031320.1-201ENST00000604177 357 ntBASIC5.27□□□□□ -1.57
CCSER1Q9C0I3 AC073137.1-201ENST00000605636 634 ntBASIC5.27□□□□□ -1.57
CCSER1Q9C0I3 AC117490.2-201ENST00000610042 594 ntBASIC5.27□□□□□ -1.57
CCSER1Q9C0I3 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCSER1Q9C0I3 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.27□□□□□ -1.57
CCSER1Q9C0I3 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCSER1Q9C0I3 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCSER1Q9C0I3 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.26□□□□□ -1.57
CCSER1Q9C0I3 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCSER1Q9C0I3 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
CCSER1Q9C0I3 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCSER1Q9C0I3 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCSER1Q9C0I3 RNVU1-6-201ENST00000364688 164 ntBASIC5.26□□□□□ -1.57
CCSER1Q9C0I3 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CCSER1Q9C0I3 AL035419.1-201ENST00000397037 564 ntBASIC5.26□□□□□ -1.57
CCSER1Q9C0I3 MIR921-201ENST00000401133 56 ntBASIC5.26□□□□□ -1.57
CCSER1Q9C0I3 OR13Z1P-201ENST00000416141 834 ntBASIC5.26□□□□□ -1.57
CCSER1Q9C0I3 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCSER1Q9C0I3 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.26□□□□□ -1.57
CCSER1Q9C0I3 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.26□□□□□ -1.57
CCSER1Q9C0I3 FABP7P1-201ENST00000424004 391 ntBASIC5.26□□□□□ -1.57
CCSER1Q9C0I3 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.26□□□□□ -1.57
CCSER1Q9C0I3 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.26□□□□□ -1.57
CCSER1Q9C0I3 AC008072.1-201ENST00000434254 824 ntBASIC5.26□□□□□ -1.57
CCSER1Q9C0I3 AC005154.2-201ENST00000438110 379 ntBASIC5.26□□□□□ -1.57
CCSER1Q9C0I3 H2AFZP5-201ENST00000446960 382 ntBASIC5.26□□□□□ -1.57
CCSER1Q9C0I3 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.26□□□□□ -1.57
CCSER1Q9C0I3 AC091685.2-201ENST00000454924 864 ntBASIC5.26□□□□□ -1.57
CCSER1Q9C0I3 RPS4XP12-201ENST00000461747 709 ntBASIC5.26□□□□□ -1.57
CCSER1Q9C0I3 AP000942.1-201ENST00000463969 747 ntBASIC5.26□□□□□ -1.57
CCSER1Q9C0I3 AC105918.1-201ENST00000474399 838 ntBASIC5.26□□□□□ -1.57
CCSER1Q9C0I3 RPS23P1-201ENST00000491662 432 ntBASIC5.26□□□□□ -1.57
CCSER1Q9C0I3 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.26□□□□□ -1.57
CCSER1Q9C0I3 RN7SKP276-201ENST00000516242 268 ntBASIC5.26□□□□□ -1.57
CCSER1Q9C0I3 SOX5P1-201ENST00000524155 1127 ntBASIC5.26□□□□□ -1.57
CCSER1Q9C0I3 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.26□□□□□ -1.57
CCSER1Q9C0I3 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
CCSER1Q9C0I3 UBE2FP2-201ENST00000566646 462 ntBASIC5.26□□□□□ -1.57
CCSER1Q9C0I3 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms