Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 Y_RNA.303-201ENST00000364998 94 ntBASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 Y_RNA.390-201ENST00000383932 102 ntBASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 RNY3P10-201ENST00000384764 102 ntBASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 AL133270.1-201ENST00000402635 279 ntBASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 AL096829.1-201ENST00000413677 457 ntBASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 RPL35AP3-201ENST00000414680 288 ntBASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 AL355433.1-201ENST00000422804 300 ntBASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 AC007568.1-201ENST00000422912 471 ntBASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 AC122718.1-201ENST00000439448 744 ntBASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 CNOT7P2-201ENST00000441051 832 ntBASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 AC064862.4-201ENST00000442180 334 ntBASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 AL035407.2-201ENST00000454090 378 ntBASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 FAM133DP-201ENST00000464802 691 ntBASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 RPL23AP37-201ENST00000479658 549 ntBASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 AC093270.2-201ENST00000486157 792 ntBASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 AC116347.2-201ENST00000514912 523 ntBASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 RNA5SP34-201ENST00000516887 130 ntBASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 AP001207.1-201ENST00000524051 481 ntBASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 SNORA59B-202ENST00000578183 701 ntBASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 SNORD95-201ENST00000579879 68 ntBASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 MIR4776-2-201ENST00000580204 80 ntBASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 AC018714.1-201ENST00000605028 208 ntBASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 AC011374.2-201ENST00000607135 526 ntBASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 AC096861.1-201ENST00000616652 240 ntBASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SYNGAP1Q96PV0 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 AC012254.3-201ENST00000591183 2117 ntBASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 RNU6-549P-201ENST00000384433 107 ntBASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 SNORA70-201ENST00000384436 135 ntBASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 MIR433-201ENST00000384837 93 ntBASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 OR7E101P-201ENST00000400428 513 ntBASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 RN7SKP161-201ENST00000411110 305 ntBASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 AC245052.5-201ENST00000416320 649 ntBASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 AC004448.2-201ENST00000422360 586 ntBASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 BX323845.3-201ENST00000428215 527 ntBASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 FABP7P2-201ENST00000429946 379 ntBASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 DEFA9P-201ENST00000433042 285 ntBASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 LARP1BP3-201ENST00000437229 869 ntBASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 ELOCP10-201ENST00000440624 327 ntBASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 ST13P20-201ENST00000447996 1065 ntBASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 XACT-201ENST00000468762 497 ntTSL 5 BASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 AC073358.1-201ENST00000505671 684 ntBASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 HSPE1P23-201ENST00000509838 286 ntBASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 RNU6-528P-201ENST00000516926 100 ntBASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 AC124293.1-201ENST00000530034 493 ntBASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 AC091078.2-201ENST00000557145 559 ntBASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 AC044913.1-201ENST00000557200 430 ntBASIC6.91□□□□□ -1.3
SYNGAP1Q96PV0 MIR3912-201ENST00000577566 105 ntBASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms