Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HPS3Q969F9 AC134050.1-201ENST00000495088 933 ntBASIC5.95□□□□□ -1.46
HPS3Q969F9 MTND4LP2-201ENST00000502312 285 ntBASIC5.95□□□□□ -1.46
HPS3Q969F9 TMEM97P2-201ENST00000517841 403 ntBASIC5.95□□□□□ -1.46
HPS3Q969F9 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.95□□□□□ -1.46
HPS3Q969F9 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.95□□□□□ -1.46
HPS3Q969F9 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.95□□□□□ -1.46
HPS3Q969F9 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.95□□□□□ -1.46
HPS3Q969F9 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.95□□□□□ -1.46
HPS3Q969F9 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.95□□□□□ -1.46
HPS3Q969F9 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
HPS3Q969F9 POLR2KP1-201ENST00000553226 168 ntBASIC5.95□□□□□ -1.46
HPS3Q969F9 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.95□□□□□ -1.46
HPS3Q969F9 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC5.95□□□□□ -1.46
HPS3Q969F9 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC5.95□□□□□ -1.46
HPS3Q969F9 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.95□□□□□ -1.46
HPS3Q969F9 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.95□□□□□ -1.46
HPS3Q969F9 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.95□□□□□ -1.46
HPS3Q969F9 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.95□□□□□ -1.46
HPS3Q969F9 AC113368.1-201ENST00000603736 382 ntBASIC5.95□□□□□ -1.46
HPS3Q969F9 SUGT1P3-202ENST00000604259 383 ntBASIC5.95□□□□□ -1.46
HPS3Q969F9 AL451049.1-201ENST00000608672 497 ntBASIC5.95□□□□□ -1.46
HPS3Q969F9 AC007204.2-201ENST00000615022 616 ntBASIC5.95□□□□□ -1.46
HPS3Q969F9 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.95□□□□□ -1.46
HPS3Q969F9 AC006386.1-201ENST00000619436 415 ntBASIC5.95□□□□□ -1.46
HPS3Q969F9 AP000484.1-201ENST00000620067 1252 ntBASIC5.95□□□□□ -1.46
HPS3Q969F9 AC123767.1-202ENST00000620407 817 ntBASIC5.95□□□□□ -1.46
HPS3Q969F9 AL691477.1-201ENST00000624398 162 ntBASIC5.95□□□□□ -1.46
HPS3Q969F9 AL049767.1-202ENST00000637826 242 ntBASIC5.95□□□□□ -1.46
HPS3Q969F9 MFSD8-220ENST00000641243 1422 ntBASIC5.95□□□□□ -1.46
HPS3Q969F9 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HPS3Q969F9 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HPS3Q969F9 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
HPS3Q969F9 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HPS3Q969F9 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HPS3Q969F9 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.95□□□□□ -1.46
HPS3Q969F9 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HPS3Q969F9 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
HPS3Q969F9 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HPS3Q969F9 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HPS3Q969F9 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.94□□□□□ -1.46
HPS3Q969F9 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.94□□□□□ -1.46
HPS3Q969F9 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
HPS3Q969F9 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
HPS3Q969F9 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.94□□□□□ -1.46
HPS3Q969F9 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HPS3Q969F9 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
HPS3Q969F9 SNORA62.2-201ENST00000364672 152 ntBASIC5.94□□□□□ -1.46
HPS3Q969F9 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.94□□□□□ -1.46
HPS3Q969F9 RNU6-549P-201ENST00000384433 107 ntBASIC5.94□□□□□ -1.46
HPS3Q969F9 MCTS2P-201ENST00000394552 546 ntBASIC5.94□□□□□ -1.46
HPS3Q969F9 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
HPS3Q969F9 RPL35AP24-201ENST00000413846 330 ntBASIC5.94□□□□□ -1.46
HPS3Q969F9 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.94□□□□□ -1.46
HPS3Q969F9 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.94□□□□□ -1.46
HPS3Q969F9 AL136231.1-201ENST00000429407 730 ntBASIC5.94□□□□□ -1.46
HPS3Q969F9 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.94□□□□□ -1.46
HPS3Q969F9 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.94□□□□□ -1.46
HPS3Q969F9 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.94□□□□□ -1.46
HPS3Q969F9 MYO5BP2-201ENST00000449815 1277 ntBASIC5.94□□□□□ -1.46
HPS3Q969F9 AC104634.1-201ENST00000452720 462 ntBASIC5.94□□□□□ -1.46
HPS3Q969F9 AC244505.3-201ENST00000454598 187 ntBASIC5.94□□□□□ -1.46
HPS3Q969F9 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.94□□□□□ -1.46
HPS3Q969F9 AC096992.1-201ENST00000459808 709 ntBASIC5.94□□□□□ -1.46
HPS3Q969F9 AC026348.1-201ENST00000462549 1053 ntBASIC5.94□□□□□ -1.46
HPS3Q969F9 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.94□□□□□ -1.46
HPS3Q969F9 RN7SL51P-201ENST00000468230 285 ntBASIC5.94□□□□□ -1.46
HPS3Q969F9 AC100832.1-201ENST00000471945 383 ntBASIC5.94□□□□□ -1.46
HPS3Q969F9 RPL15P21-201ENST00000495592 567 ntBASIC5.94□□□□□ -1.46
HPS3Q969F9 AL136038.1-201ENST00000497246 351 ntBASIC5.94□□□□□ -1.46
HPS3Q969F9 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.94□□□□□ -1.46
HPS3Q969F9 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.94□□□□□ -1.46
HPS3Q969F9 IGKV2D-10-201ENST00000520194 281 ntBASIC5.94□□□□□ -1.46
HPS3Q969F9 MTND2P38-201ENST00000522536 667 ntBASIC5.94□□□□□ -1.46
HPS3Q969F9 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.94□□□□□ -1.46
HPS3Q969F9 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.94□□□□□ -1.46
HPS3Q969F9 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HPS3Q969F9 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.94□□□□□ -1.46
HPS3Q969F9 AC051619.2-201ENST00000559063 397 ntBASIC5.94□□□□□ -1.46
HPS3Q969F9 AC022884.3-201ENST00000579571 248 ntBASIC5.94□□□□□ -1.46
HPS3Q969F9 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.94□□□□□ -1.46
HPS3Q969F9 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.94□□□□□ -1.46
HPS3Q969F9 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.94□□□□□ -1.46
HPS3Q969F9 AC109583.2-201ENST00000617367 129 ntBASIC5.94□□□□□ -1.46
HPS3Q969F9 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
HPS3Q969F9 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
HPS3Q969F9 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
HPS3Q969F9 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
HPS3Q969F9 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
HPS3Q969F9 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HPS3Q969F9 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HPS3Q969F9 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.94□□□□□ -1.46
HPS3Q969F9 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HPS3Q969F9 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.94□□□□□ -1.46
HPS3Q969F9 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HPS3Q969F9 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HPS3Q969F9 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.94□□□□□ -1.46
HPS3Q969F9 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HPS3Q969F9 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HPS3Q969F9 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms