Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.44□□□□□ -1.54
RNF220Q5VTB9 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RNF220Q5VTB9 AC079776.3-201ENST00000450665 370 ntBASIC5.44□□□□□ -1.54
RNF220Q5VTB9 AC011979.1-201ENST00000472300 483 ntBASIC5.44□□□□□ -1.54
RNF220Q5VTB9 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.44□□□□□ -1.54
RNF220Q5VTB9 DYNLL1P6-201ENST00000503440 264 ntBASIC5.44□□□□□ -1.54
RNF220Q5VTB9 AC091874.2-201ENST00000505889 720 ntBASIC5.44□□□□□ -1.54
RNF220Q5VTB9 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.44□□□□□ -1.54
RNF220Q5VTB9 AC021106.1-201ENST00000509020 1058 ntBASIC5.44□□□□□ -1.54
RNF220Q5VTB9 AC109481.1-201ENST00000509173 282 ntBASIC5.44□□□□□ -1.54
RNF220Q5VTB9 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.44□□□□□ -1.54
RNF220Q5VTB9 AC092709.1-201ENST00000521355 1045 ntBASIC5.44□□□□□ -1.54
RNF220Q5VTB9 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
RNF220Q5VTB9 OR4A2P-201ENST00000527276 913 ntBASIC5.44□□□□□ -1.54
RNF220Q5VTB9 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
RNF220Q5VTB9 OR4C2P-201ENST00000530855 1064 ntBASIC5.44□□□□□ -1.54
RNF220Q5VTB9 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5.44□□□□□ -1.54
RNF220Q5VTB9 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.44□□□□□ -1.54
RNF220Q5VTB9 AC006272.2-201ENST00000594725 163 ntBASIC5.44□□□□□ -1.54
RNF220Q5VTB9 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.44□□□□□ -1.54
RNF220Q5VTB9 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.44□□□□□ -1.54
RNF220Q5VTB9 AC008751.2-201ENST00000597885 980 ntBASIC5.44□□□□□ -1.54
RNF220Q5VTB9 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
RNF220Q5VTB9 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RNF220Q5VTB9 AC092954.1-201ENST00000609121 445 ntBASIC5.44□□□□□ -1.54
RNF220Q5VTB9 AC234782.5-201ENST00000617723 324 ntBASIC5.44□□□□□ -1.54
RNF220Q5VTB9 AC068057.2-201ENST00000624047 895 ntBASIC5.44□□□□□ -1.54
RNF220Q5VTB9 AC079416.3-201ENST00000624479 549 ntBASIC5.44□□□□□ -1.54
RNF220Q5VTB9 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.44□□□□□ -1.54
RNF220Q5VTB9 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.44□□□□□ -1.54
RNF220Q5VTB9 OR55B1P-203ENST00000641518 2602 ntBASIC5.44□□□□□ -1.54
RNF220Q5VTB9 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
RNF220Q5VTB9 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
RNF220Q5VTB9 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RNF220Q5VTB9 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.44□□□□□ -1.54
RNF220Q5VTB9 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
RNF220Q5VTB9 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
RNF220Q5VTB9 AP001642.1-201ENST00000624727 2117 ntBASIC5.44□□□□□ -1.54
RNF220Q5VTB9 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RNF220Q5VTB9 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
RNF220Q5VTB9 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 OR9K1P-201ENST00000326513 941 ntBASIC5.43□□□□□ -1.54
RNF220Q5VTB9 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 RN7SKP86-201ENST00000410454 332 ntBASIC5.43□□□□□ -1.54
RNF220Q5VTB9 RNU6-272P-201ENST00000411028 104 ntBASIC5.43□□□□□ -1.54
RNF220Q5VTB9 AC009302.1-201ENST00000417147 390 ntBASIC5.43□□□□□ -1.54
RNF220Q5VTB9 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 AC007435.1-201ENST00000421086 415 ntBASIC5.43□□□□□ -1.54
RNF220Q5VTB9 AC099336.2-201ENST00000422457 254 ntBASIC5.43□□□□□ -1.54
RNF220Q5VTB9 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 MTCO1P54-201ENST00000430139 712 ntBASIC5.43□□□□□ -1.54
RNF220Q5VTB9 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 BMS1P10-201ENST00000443754 1120 ntBASIC5.43□□□□□ -1.54
RNF220Q5VTB9 AC099560.2-201ENST00000457554 255 ntBASIC5.43□□□□□ -1.54
RNF220Q5VTB9 VPS26AP1-201ENST00000483197 979 ntBASIC5.43□□□□□ -1.54
RNF220Q5VTB9 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 AC112484.3-201ENST00000505910 329 ntBASIC5.43□□□□□ -1.54
RNF220Q5VTB9 AC008885.2-201ENST00000509506 930 ntBASIC5.43□□□□□ -1.54
RNF220Q5VTB9 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 SNORA3.4-201ENST00000515969 96 ntBASIC5.43□□□□□ -1.54
RNF220Q5VTB9 RNU5A-4P-201ENST00000516588 111 ntBASIC5.43□□□□□ -1.54
RNF220Q5VTB9 CDC42P3-201ENST00000518493 633 ntBASIC5.43□□□□□ -1.54
RNF220Q5VTB9 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.43□□□□□ -1.54
RNF220Q5VTB9 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 AC004217.3-201ENST00000551552 878 ntBASIC5.43□□□□□ -1.54
RNF220Q5VTB9 AC145350.1-201ENST00000567426 208 ntBASIC5.43□□□□□ -1.54
RNF220Q5VTB9 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 AC127024.5-201ENST00000580085 462 ntBASIC5.43□□□□□ -1.54
RNF220Q5VTB9 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 MRPS35P3-201ENST00000603189 709 ntBASIC5.43□□□□□ -1.54
RNF220Q5VTB9 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 TUSC7.1-201ENST00000610969 165 ntBASIC5.43□□□□□ -1.54
RNF220Q5VTB9 AC022509.4-201ENST00000621404 572 ntBASIC5.43□□□□□ -1.54
RNF220Q5VTB9 AC015804.1-201ENST00000622935 435 ntBASIC5.43□□□□□ -1.54
RNF220Q5VTB9 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.43□□□□□ -1.54
RNF220Q5VTB9 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms