Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 HMGB3P7-201ENST00000400214 611 ntBASIC4.2□□□□□ -1.74
CCDC58Q4VC31 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.2□□□□□ -1.74
CCDC58Q4VC31 AC099535.1-201ENST00000408928 371 ntBASIC4.2□□□□□ -1.74
CCDC58Q4VC31 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC58Q4VC31 AF186996.5-201ENST00000418098 904 ntBASIC4.2□□□□□ -1.74
CCDC58Q4VC31 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC58Q4VC31 MTCO1P51-201ENST00000427672 1060 ntBASIC4.2□□□□□ -1.74
CCDC58Q4VC31 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC58Q4VC31 OR52B5P-201ENST00000435337 951 ntBASIC4.2□□□□□ -1.74
CCDC58Q4VC31 AL137845.2-201ENST00000444292 988 ntBASIC4.2□□□□□ -1.74
CCDC58Q4VC31 ATP5G1P3-201ENST00000463301 410 ntBASIC4.2□□□□□ -1.74
CCDC58Q4VC31 AC106872.2-201ENST00000494303 480 ntBASIC4.2□□□□□ -1.74
CCDC58Q4VC31 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC58Q4VC31 PPBPP1-201ENST00000510807 373 ntBASIC4.2□□□□□ -1.74
CCDC58Q4VC31 snoU109.6-201ENST00000516831 118 ntBASIC4.2□□□□□ -1.74
CCDC58Q4VC31 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC58Q4VC31 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.2□□□□□ -1.74
CCDC58Q4VC31 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC58Q4VC31 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.2□□□□□ -1.74
CCDC58Q4VC31 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.2□□□□□ -1.74
CCDC58Q4VC31 AC015912.2-201ENST00000571053 181 ntBASIC4.2□□□□□ -1.74
CCDC58Q4VC31 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC58Q4VC31 AC008521.2-201ENST00000591021 259 ntBASIC4.2□□□□□ -1.74
CCDC58Q4VC31 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC58Q4VC31 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC58Q4VC31 AL035461.2-201ENST00000619201 524 ntBASIC4.2□□□□□ -1.74
CCDC58Q4VC31 MIR4727-201ENST00000622232 55 ntBASIC4.2□□□□□ -1.74
CCDC58Q4VC31 AL359742.1-201ENST00000622497 540 ntBASIC4.2□□□□□ -1.74
CCDC58Q4VC31 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC58Q4VC31 OR52B5P-202ENST00000641118 1110 ntBASIC4.2□□□□□ -1.74
CCDC58Q4VC31 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC58Q4VC31 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC58Q4VC31 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC58Q4VC31 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
CCDC58Q4VC31 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC58Q4VC31 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC58Q4VC31 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
CCDC58Q4VC31 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
CCDC58Q4VC31 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
CCDC58Q4VC31 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC58Q4VC31 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
CCDC58Q4VC31 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CCDC58Q4VC31 FIG4-202ENST00000368941 791 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC58Q4VC31 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CCDC58Q4VC31 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC58Q4VC31 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC58Q4VC31 AL138899.2-201ENST00000439139 499 ntBASIC4.19□□□□□ -1.74
CCDC58Q4VC31 RPL34P20-201ENST00000442771 351 ntBASIC4.19□□□□□ -1.74
CCDC58Q4VC31 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC58Q4VC31 EIF4A1P11-201ENST00000451239 222 ntBASIC4.19□□□□□ -1.74
CCDC58Q4VC31 AL389915.2-201ENST00000454576 441 ntBASIC4.19□□□□□ -1.74
CCDC58Q4VC31 OR2AO1P-201ENST00000476497 403 ntBASIC4.19□□□□□ -1.74
CCDC58Q4VC31 RN7SL319P-201ENST00000480656 221 ntBASIC4.19□□□□□ -1.74
CCDC58Q4VC31 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC58Q4VC31 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC58Q4VC31 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.19□□□□□ -1.74
CCDC58Q4VC31 HNRNPKP5-201ENST00000515300 253 ntBASIC4.19□□□□□ -1.74
CCDC58Q4VC31 RFPL1S-203ENST00000539579 330 ntBASIC4.19□□□□□ -1.74
CCDC58Q4VC31 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CCDC58Q4VC31 AL352979.3-201ENST00000553515 247 ntBASIC4.19□□□□□ -1.74
CCDC58Q4VC31 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC58Q4VC31 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC58Q4VC31 AC209154.1-201ENST00000582156 337 ntBASIC4.19□□□□□ -1.74
CCDC58Q4VC31 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC58Q4VC31 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC58Q4VC31 FKBP1AP1-201ENST00000594588 318 ntBASIC4.19□□□□□ -1.74
CCDC58Q4VC31 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC58Q4VC31 AC017076.1-201ENST00000607613 578 ntBASIC4.19□□□□□ -1.74
CCDC58Q4VC31 OR6R2P-201ENST00000609216 300 ntBASIC4.19□□□□□ -1.74
CCDC58Q4VC31 AC079395.2-201ENST00000610982 737 ntBASIC4.19□□□□□ -1.74
CCDC58Q4VC31 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC58Q4VC31 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC58Q4VC31 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CCDC58Q4VC31 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC58Q4VC31 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC58Q4VC31 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC58Q4VC31 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.19□□□□□ -1.74
CCDC58Q4VC31 ZNF733P-202ENST00000444809 1573 ntBASIC4.19□□□□□ -1.74
CCDC58Q4VC31 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC58Q4VC31 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC58Q4VC31 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC58Q4VC31 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
CCDC58Q4VC31 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC58Q4VC31 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.18□□□□□ -1.74
CCDC58Q4VC31 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC58Q4VC31 SNURFL-201ENST00000309296 343 ntBASIC4.18□□□□□ -1.74
CCDC58Q4VC31 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.18□□□□□ -1.74
CCDC58Q4VC31 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.18□□□□□ -1.74
CCDC58Q4VC31 SNORA70-201ENST00000384436 135 ntBASIC4.18□□□□□ -1.74
CCDC58Q4VC31 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC58Q4VC31 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.18□□□□□ -1.74
CCDC58Q4VC31 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC58Q4VC31 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC58Q4VC31 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC58Q4VC31 MAPRE1P3-201ENST00000435438 796 ntBASIC4.18□□□□□ -1.74
CCDC58Q4VC31 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC58Q4VC31 PSMC1P13-201ENST00000458195 985 ntBASIC4.18□□□□□ -1.74
CCDC58Q4VC31 AC023141.9-201ENST00000458734 412 ntBASIC4.18□□□□□ -1.74
CCDC58Q4VC31 RN7SL717P-201ENST00000478343 297 ntBASIC4.18□□□□□ -1.74
CCDC58Q4VC31 AC012158.1-204ENST00000483430 465 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms