Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AC233702.9-201ENST00000581528 203 ntBASIC4.83□□□□□ -1.64
PTPN20Q4JDL3 AC007448.1-201ENST00000582714 234 ntBASIC4.83□□□□□ -1.64
PTPN20Q4JDL3 AC097505.1-201ENST00000610199 565 ntBASIC4.83□□□□□ -1.64
PTPN20Q4JDL3 MIR7703-201ENST00000620784 77 ntBASIC4.83□□□□□ -1.64
PTPN20Q4JDL3 AC005086.4-201ENST00000623065 213 ntBASIC4.83□□□□□ -1.64
PTPN20Q4JDL3 AC006840.1-201ENST00000623069 542 ntBASIC4.83□□□□□ -1.64
PTPN20Q4JDL3 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.83□□□□□ -1.64
PTPN20Q4JDL3 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PTPN20Q4JDL3 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
PTPN20Q4JDL3 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
PTPN20Q4JDL3 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTPN20Q4JDL3 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTPN20Q4JDL3 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
PTPN20Q4JDL3 OR14L1P-202ENST00000641545 3009 ntBASIC4.83□□□□□ -1.64
PTPN20Q4JDL3 MAPK10-349ENST00000641767 3661 ntBASIC4.83□□□□□ -1.64
PTPN20Q4JDL3 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PTPN20Q4JDL3 AC108467.2-201ENST00000617640 1597 ntBASIC4.82□□□□□ -1.64
PTPN20Q4JDL3 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
PTPN20Q4JDL3 AL606537.1-201ENST00000607258 2011 ntBASIC4.82□□□□□ -1.64
PTPN20Q4JDL3 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTPN20Q4JDL3 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTPN20Q4JDL3 AC108751.5-201ENST00000492880 1336 ntBASIC4.82□□□□□ -1.64
PTPN20Q4JDL3 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.82□□□□□ -1.64
PTPN20Q4JDL3 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.82□□□□□ -1.64
PTPN20Q4JDL3 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PTPN20Q4JDL3 SNORA71.2-201ENST00000364941 134 ntBASIC4.82□□□□□ -1.64
PTPN20Q4JDL3 SNORA70F-201ENST00000384142 135 ntBASIC4.82□□□□□ -1.64
PTPN20Q4JDL3 RNA5SP397-201ENST00000391323 118 ntBASIC4.82□□□□□ -1.64
PTPN20Q4JDL3 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.82□□□□□ -1.64
PTPN20Q4JDL3 RPL21P91-201ENST00000429231 479 ntBASIC4.82□□□□□ -1.64
PTPN20Q4JDL3 RN7SL354P-201ENST00000469282 294 ntBASIC4.82□□□□□ -1.64
PTPN20Q4JDL3 OR11I1P-201ENST00000486033 954 ntBASIC4.82□□□□□ -1.64
PTPN20Q4JDL3 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.82□□□□□ -1.64
PTPN20Q4JDL3 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PTPN20Q4JDL3 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.82□□□□□ -1.64
PTPN20Q4JDL3 AC023762.1-201ENST00000603280 584 ntBASIC4.82□□□□□ -1.64
PTPN20Q4JDL3 AL133338.2-201ENST00000604292 736 ntBASIC4.82□□□□□ -1.64
PTPN20Q4JDL3 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.82□□□□□ -1.64
PTPN20Q4JDL3 MIR6780A-201ENST00000615089 68 ntBASIC4.82□□□□□ -1.64
PTPN20Q4JDL3 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PTPN20Q4JDL3 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.82□□□□□ -1.64
PTPN20Q4JDL3 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTPN20Q4JDL3 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.82□□□□□ -1.64
PTPN20Q4JDL3 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.82□□□□□ -1.64
PTPN20Q4JDL3 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PTPN20Q4JDL3 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTPN20Q4JDL3 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PTPN20Q4JDL3 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PTPN20Q4JDL3 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.81□□□□□ -1.64
PTPN20Q4JDL3 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
PTPN20Q4JDL3 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PTPN20Q4JDL3 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.81□□□□□ -1.64
PTPN20Q4JDL3 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
PTPN20Q4JDL3 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.81□□□□□ -1.64
PTPN20Q4JDL3 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.81□□□□□ -1.64
PTPN20Q4JDL3 AC103591.2-201ENST00000265259 766 ntBASIC4.81□□□□□ -1.64
PTPN20Q4JDL3 RNU6-1320P-201ENST00000390838 107 ntBASIC4.81□□□□□ -1.64
PTPN20Q4JDL3 RNU6-1269P-201ENST00000391139 107 ntBASIC4.81□□□□□ -1.64
PTPN20Q4JDL3 AC233289.1-201ENST00000403700 508 ntBASIC4.81□□□□□ -1.64
PTPN20Q4JDL3 OR13Z1P-201ENST00000416141 834 ntBASIC4.81□□□□□ -1.64
PTPN20Q4JDL3 AC019050.1-201ENST00000418508 492 ntBASIC4.81□□□□□ -1.64
PTPN20Q4JDL3 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.81□□□□□ -1.64
PTPN20Q4JDL3 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.81□□□□□ -1.64
PTPN20Q4JDL3 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PTPN20Q4JDL3 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PTPN20Q4JDL3 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.81□□□□□ -1.64
PTPN20Q4JDL3 AL513533.1-201ENST00000453728 415 ntBASIC4.81□□□□□ -1.64
PTPN20Q4JDL3 RNU6-599P-201ENST00000459383 107 ntBASIC4.81□□□□□ -1.64
PTPN20Q4JDL3 RNU6-1193P-201ENST00000459461 107 ntBASIC4.81□□□□□ -1.64
PTPN20Q4JDL3 RPL7AP10-201ENST00000481016 791 ntBASIC4.81□□□□□ -1.64
PTPN20Q4JDL3 NPM1P29-201ENST00000483112 803 ntBASIC4.81□□□□□ -1.64
PTPN20Q4JDL3 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.81□□□□□ -1.64
PTPN20Q4JDL3 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.81□□□□□ -1.64
PTPN20Q4JDL3 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.81□□□□□ -1.64
PTPN20Q4JDL3 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.81□□□□□ -1.64
PTPN20Q4JDL3 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.81□□□□□ -1.64
PTPN20Q4JDL3 ADAD1P2-201ENST00000588476 646 ntBASIC4.81□□□□□ -1.64
PTPN20Q4JDL3 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.81□□□□□ -1.64
PTPN20Q4JDL3 AC090181.2-201ENST00000602975 672 ntBASIC4.81□□□□□ -1.64
PTPN20Q4JDL3 AL161616.1-201ENST00000611867 286 ntBASIC4.81□□□□□ -1.64
PTPN20Q4JDL3 RNU6-368P-201ENST00000620928 107 ntBASIC4.81□□□□□ -1.64
PTPN20Q4JDL3 RNU6-538P-201ENST00000622329 107 ntBASIC4.81□□□□□ -1.64
PTPN20Q4JDL3 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.81□□□□□ -1.64
PTPN20Q4JDL3 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.81□□□□□ -1.64
PTPN20Q4JDL3 HSPD1P14-201ENST00000432666 1618 ntBASIC4.81□□□□□ -1.64
PTPN20Q4JDL3 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PTPN20Q4JDL3 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PTPN20Q4JDL3 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.81□□□□□ -1.64
PTPN20Q4JDL3 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
PTPN20Q4JDL3 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PTPN20Q4JDL3 VN2R3P-201ENST00000422626 1412 ntBASIC4.8□□□□□ -1.64
PTPN20Q4JDL3 AP000542.2-201ENST00000623199 6179 ntBASIC4.8□□□□□ -1.64
PTPN20Q4JDL3 AC021242.1-201ENST00000507315 2035 ntBASIC4.8□□□□□ -1.64
PTPN20Q4JDL3 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PTPN20Q4JDL3 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PTPN20Q4JDL3 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PTPN20Q4JDL3 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
PTPN20Q4JDL3 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PTPN20Q4JDL3 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.8□□□□□ -1.64
PTPN20Q4JDL3 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms