Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 BPTFP1-201ENST00000579209 492 ntBASIC6.63□□□□□ -1.35
SOX4Q06945 MIR4666A-201ENST00000580160 79 ntBASIC6.63□□□□□ -1.35
SOX4Q06945 AP005119.1-201ENST00000580956 292 ntBASIC6.63□□□□□ -1.35
SOX4Q06945 RNU4ATAC-201ENST00000580972 127 ntBASIC6.63□□□□□ -1.35
SOX4Q06945 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.63□□□□□ -1.35
SOX4Q06945 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.63□□□□□ -1.35
SOX4Q06945 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.63□□□□□ -1.35
SOX4Q06945 AL049634.3-201ENST00000604968 457 ntBASIC6.63□□□□□ -1.35
SOX4Q06945 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SOX4Q06945 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.63□□□□□ -1.35
SOX4Q06945 AL031651.1-201ENST00000615357 1438 ntBASIC6.63□□□□□ -1.35
SOX4Q06945 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.63□□□□□ -1.35
SOX4Q06945 AL137067.2-201ENST00000621202 131 ntBASIC6.63□□□□□ -1.35
SOX4Q06945 RPL23AP61-201ENST00000623642 466 ntBASIC6.63□□□□□ -1.35
SOX4Q06945 OR52B5P-202ENST00000641118 1110 ntBASIC6.63□□□□□ -1.35
SOX4Q06945 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
SOX4Q06945 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SOX4Q06945 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SOX4Q06945 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SOX4Q06945 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SOX4Q06945 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SOX4Q06945 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.62□□□□□ -1.35
SOX4Q06945 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SOX4Q06945 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.62□□□□□ -1.35
SOX4Q06945 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SOX4Q06945 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
SOX4Q06945 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.62□□□□□ -1.35
SOX4Q06945 AC092111.2-201ENST00000611627 1414 ntBASIC6.62□□□□□ -1.35
SOX4Q06945 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SOX4Q06945 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SOX4Q06945 HDAC1P2-201ENST00000453661 1398 ntBASIC6.62□□□□□ -1.35
SOX4Q06945 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.62□□□□□ -1.35
SOX4Q06945 RNA5SP273-201ENST00000362484 113 ntBASIC6.62□□□□□ -1.35
SOX4Q06945 RNA5SP477-201ENST00000362639 119 ntBASIC6.62□□□□□ -1.35
SOX4Q06945 RNU5F-7P-201ENST00000363696 115 ntBASIC6.62□□□□□ -1.35
SOX4Q06945 Y_RNA.372-201ENST00000365599 102 ntBASIC6.62□□□□□ -1.35
SOX4Q06945 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
SOX4Q06945 RPS3AP23-201ENST00000401762 784 ntBASIC6.62□□□□□ -1.35
SOX4Q06945 CCNG1P1-201ENST00000406783 885 ntBASIC6.62□□□□□ -1.35
SOX4Q06945 RN7SKP285-201ENST00000410137 318 ntBASIC6.62□□□□□ -1.35
SOX4Q06945 RPL35AP31-201ENST00000418340 337 ntBASIC6.62□□□□□ -1.35
SOX4Q06945 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC6.62□□□□□ -1.35
SOX4Q06945 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.62□□□□□ -1.35
SOX4Q06945 AL389925.1-201ENST00000432257 728 ntBASIC6.62□□□□□ -1.35
SOX4Q06945 MTND4LP10-201ENST00000435146 291 ntBASIC6.62□□□□□ -1.35
SOX4Q06945 AC242426.1-201ENST00000435270 960 ntBASIC6.62□□□□□ -1.35
SOX4Q06945 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.62□□□□□ -1.35
SOX4Q06945 FTLP8-201ENST00000446770 267 ntBASIC6.62□□□□□ -1.35
SOX4Q06945 PSPHP1-201ENST00000450062 261 ntBASIC6.62□□□□□ -1.35
SOX4Q06945 AC073594.1-201ENST00000462065 364 ntBASIC6.62□□□□□ -1.35
SOX4Q06945 RPL30P9-201ENST00000465586 330 ntBASIC6.62□□□□□ -1.35
SOX4Q06945 AC068522.1-201ENST00000482895 345 ntBASIC6.62□□□□□ -1.35
SOX4Q06945 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC6.62□□□□□ -1.35
SOX4Q06945 RPL7P24-201ENST00000493052 752 ntBASIC6.62□□□□□ -1.35
SOX4Q06945 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC6.62□□□□□ -1.35
SOX4Q06945 NENFP3-201ENST00000503735 313 ntBASIC6.62□□□□□ -1.35
SOX4Q06945 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.62□□□□□ -1.35
SOX4Q06945 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC6.62□□□□□ -1.35
SOX4Q06945 AC024589.1-201ENST00000512207 263 ntBASIC6.62□□□□□ -1.35
SOX4Q06945 AC108120.2-201ENST00000512973 294 ntBASIC6.62□□□□□ -1.35
SOX4Q06945 PRMT5P1-201ENST00000514351 598 ntBASIC6.62□□□□□ -1.35
SOX4Q06945 MTHFD2P4-201ENST00000515074 1025 ntBASIC6.62□□□□□ -1.35
SOX4Q06945 RNU6-1153P-201ENST00000516760 105 ntBASIC6.62□□□□□ -1.35
SOX4Q06945 CA1-215ENST00000522389 551 ntTSL 3 BASIC6.62□□□□□ -1.35
SOX4Q06945 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC6.62□□□□□ -1.35
SOX4Q06945 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC6.62□□□□□ -1.35
SOX4Q06945 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC6.62□□□□□ -1.35
SOX4Q06945 AC068305.2-201ENST00000550567 1205 ntBASIC6.62□□□□□ -1.35
SOX4Q06945 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC6.62□□□□□ -1.35
SOX4Q06945 AC091489.2-201ENST00000566263 604 ntBASIC6.62□□□□□ -1.35
SOX4Q06945 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC6.62□□□□□ -1.35
SOX4Q06945 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC6.62□□□□□ -1.35
SOX4Q06945 UBE2V2P2-201ENST00000587677 504 ntBASIC6.62□□□□□ -1.35
SOX4Q06945 NPIPB1P-202ENST00000588786 828 ntBASIC6.62□□□□□ -1.35
SOX4Q06945 AC010680.3-201ENST00000604215 520 ntBASIC6.62□□□□□ -1.35
SOX4Q06945 AC004890.3-201ENST00000605566 1095 ntBASIC6.62□□□□□ -1.35
SOX4Q06945 AL445222.1-201ENST00000607259 628 ntBASIC6.62□□□□□ -1.35
SOX4Q06945 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.62□□□□□ -1.35
SOX4Q06945 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC6.62□□□□□ -1.35
SOX4Q06945 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
SOX4Q06945 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.62□□□□□ -1.35
SOX4Q06945 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.62□□□□□ -1.35
SOX4Q06945 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.62□□□□□ -1.35
SOX4Q06945 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SOX4Q06945 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SOX4Q06945 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SOX4Q06945 AL590763.1-201ENST00000398297 1545 ntBASIC6.61□□□□□ -1.35
SOX4Q06945 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SOX4Q06945 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.61□□□□□ -1.35
SOX4Q06945 AP004289.1-201ENST00000436307 2205 ntBASIC6.61□□□□□ -1.35
SOX4Q06945 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SOX4Q06945 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SOX4Q06945 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.61□□□□□ -1.35
SOX4Q06945 AC135352.1-201ENST00000506173 1418 ntBASIC6.61□□□□□ -1.35
SOX4Q06945 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
SOX4Q06945 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
SOX4Q06945 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
SOX4Q06945 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.61□□□□□ -1.35
SOX4Q06945 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SOX4Q06945 RNA5SP333-201ENST00000363466 118 ntBASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms