Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
RHBDL3P58872 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC6.16□□□□□ -1.42
RHBDL3P58872 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RHBDL3P58872 RPL23AP59-201ENST00000399415 461 ntBASIC6.16□□□□□ -1.42
RHBDL3P58872 AL590609.2-201ENST00000421430 368 ntBASIC6.16□□□□□ -1.42
RHBDL3P58872 AC021876.1-201ENST00000425959 359 ntBASIC6.16□□□□□ -1.42
RHBDL3P58872 FABP7P2-201ENST00000429946 379 ntBASIC6.16□□□□□ -1.42
RHBDL3P58872 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RHBDL3P58872 RN7SL814P-201ENST00000487715 300 ntBASIC6.16□□□□□ -1.42
RHBDL3P58872 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC6.16□□□□□ -1.42
RHBDL3P58872 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
RHBDL3P58872 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC6.16□□□□□ -1.42
RHBDL3P58872 UBE2Q2P10-201ENST00000514854 900 ntBASIC6.16□□□□□ -1.42
RHBDL3P58872 RNU5A-7P-201ENST00000515979 116 ntBASIC6.16□□□□□ -1.42
RHBDL3P58872 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC6.16□□□□□ -1.42
RHBDL3P58872 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC6.16□□□□□ -1.42
RHBDL3P58872 AC022360.1-201ENST00000521058 340 ntBASIC6.16□□□□□ -1.42
RHBDL3P58872 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.16□□□□□ -1.42
RHBDL3P58872 AL121594.4-201ENST00000556211 1196 ntBASIC6.16□□□□□ -1.42
RHBDL3P58872 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC6.16□□□□□ -1.42
RHBDL3P58872 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.16□□□□□ -1.42
RHBDL3P58872 GMFG-202ENST00000594700 397 ntTSL 2 BASIC6.16□□□□□ -1.42
RHBDL3P58872 MEMO1P5-201ENST00000604810 406 ntBASIC6.16□□□□□ -1.42
RHBDL3P58872 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.16□□□□□ -1.42
RHBDL3P58872 AC006946.3-201ENST00000609791 756 ntBASIC6.16□□□□□ -1.42
RHBDL3P58872 AC010632.3-201ENST00000611377 369 ntBASIC6.16□□□□□ -1.42
RHBDL3P58872 EIF3FP1-201ENST00000613970 806 ntBASIC6.16□□□□□ -1.42
RHBDL3P58872 VN1R9P-201ENST00000614184 867 ntBASIC6.16□□□□□ -1.42
RHBDL3P58872 FRG1HP-204ENST00000617940 757 ntBASIC6.16□□□□□ -1.42
RHBDL3P58872 AC073569.3-201ENST00000619055 682 ntBASIC6.16□□□□□ -1.42
RHBDL3P58872 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC6.16□□□□□ -1.42
RHBDL3P58872 AC024595.1-201ENST00000623088 387 ntBASIC6.16□□□□□ -1.42
RHBDL3P58872 AC015908.5-201ENST00000623289 343 ntBASIC6.16□□□□□ -1.42
RHBDL3P58872 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC6.16□□□□□ -1.42
RHBDL3P58872 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
RHBDL3P58872 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
RHBDL3P58872 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
RHBDL3P58872 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RHBDL3P58872 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RHBDL3P58872 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RHBDL3P58872 AL133268.1-201ENST00000405676 1401 ntBASIC6.16□□□□□ -1.42
RHBDL3P58872 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
RHBDL3P58872 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RHBDL3P58872 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RHBDL3P58872 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RHBDL3P58872 HSPA8P19-201ENST00000505359 1517 ntBASIC6.15□□□□□ -1.42
RHBDL3P58872 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RHBDL3P58872 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RHBDL3P58872 RNA5SP428-201ENST00000365129 132 ntBASIC6.15□□□□□ -1.42
RHBDL3P58872 BMS1P3-201ENST00000372011 932 ntBASIC6.15□□□□□ -1.42
RHBDL3P58872 AL035419.1-201ENST00000397037 564 ntBASIC6.15□□□□□ -1.42
RHBDL3P58872 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.15□□□□□ -1.42
RHBDL3P58872 MTND4P11-201ENST00000417020 1058 ntBASIC6.15□□□□□ -1.42
RHBDL3P58872 AL360081.1-201ENST00000428299 555 ntBASIC6.15□□□□□ -1.42
RHBDL3P58872 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC6.15□□□□□ -1.42
RHBDL3P58872 AL772161.1-201ENST00000439130 476 ntBASIC6.15□□□□□ -1.42
RHBDL3P58872 ARL5AP2-201ENST00000444698 533 ntBASIC6.15□□□□□ -1.42
RHBDL3P58872 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC6.15□□□□□ -1.42
RHBDL3P58872 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC6.15□□□□□ -1.42
RHBDL3P58872 RPS17P11-201ENST00000474297 293 ntBASIC6.15□□□□□ -1.42
RHBDL3P58872 RPL7P16-201ENST00000479738 738 ntBASIC6.15□□□□□ -1.42
RHBDL3P58872 AC083982.1-201ENST00000485679 344 ntBASIC6.15□□□□□ -1.42
RHBDL3P58872 RPS24P16-201ENST00000497294 392 ntBASIC6.15□□□□□ -1.42
RHBDL3P58872 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RHBDL3P58872 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.15□□□□□ -1.42
RHBDL3P58872 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.15□□□□□ -1.42
RHBDL3P58872 AC136777.2-201ENST00000522979 358 ntBASIC6.15□□□□□ -1.42
RHBDL3P58872 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.15□□□□□ -1.42
RHBDL3P58872 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC6.15□□□□□ -1.42
RHBDL3P58872 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.15□□□□□ -1.42
RHBDL3P58872 HNRNPCP1-201ENST00000556181 766 ntBASIC6.15□□□□□ -1.42
RHBDL3P58872 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.15□□□□□ -1.42
RHBDL3P58872 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RHBDL3P58872 ATP5F1P7-201ENST00000567330 760 ntBASIC6.15□□□□□ -1.42
RHBDL3P58872 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC6.15□□□□□ -1.42
RHBDL3P58872 AC012254.4-201ENST00000588843 273 ntBASIC6.15□□□□□ -1.42
RHBDL3P58872 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC6.15□□□□□ -1.42
RHBDL3P58872 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC6.15□□□□□ -1.42
RHBDL3P58872 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
RHBDL3P58872 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
RHBDL3P58872 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
RHBDL3P58872 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC6.15□□□□□ -1.43
RHBDL3P58872 AC004158.1-201ENST00000564508 4319 ntBASIC6.15□□□□□ -1.43
RHBDL3P58872 AC100871.1-201ENST00000507871 1456 ntBASIC6.15□□□□□ -1.43
RHBDL3P58872 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
RHBDL3P58872 AL450326.2-201ENST00000421913 1962 ntBASIC6.15□□□□□ -1.43
RHBDL3P58872 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.15□□□□□ -1.43
RHBDL3P58872 AC006210.2-201ENST00000367074 1545 ntBASIC6.15□□□□□ -1.43
RHBDL3P58872 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
RHBDL3P58872 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
RHBDL3P58872 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
RHBDL3P58872 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RHBDL3P58872 AC092162.3-201ENST00000624511 1624 ntBASIC6.14□□□□□ -1.43
RHBDL3P58872 IRF5P1-201ENST00000504852 2164 ntBASIC6.14□□□□□ -1.43
RHBDL3P58872 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
RHBDL3P58872 AL132640.2-201ENST00000559968 1698 ntBASIC6.14□□□□□ -1.43
RHBDL3P58872 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC6.14□□□□□ -1.43
RHBDL3P58872 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
RHBDL3P58872 GNAS-202ENST00000306090 477 ntTSL 5 BASIC6.14□□□□□ -1.43
RHBDL3P58872 RN7SKP103-201ENST00000363848 320 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms