Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.52□□□□□ -1.69
VSX2P58304 AL031584.1-201ENST00000447169 754 ntBASIC4.52□□□□□ -1.69
VSX2P58304 AC073264.2-201ENST00000448886 166 ntBASIC4.52□□□□□ -1.69
VSX2P58304 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.52□□□□□ -1.69
VSX2P58304 RPL12P20-201ENST00000475538 479 ntBASIC4.52□□□□□ -1.69
VSX2P58304 AC092593.2-201ENST00000513866 913 ntBASIC4.52□□□□□ -1.69
VSX2P58304 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.52□□□□□ -1.69
VSX2P58304 IGKV1-32-201ENST00000519290 311 ntBASIC4.52□□□□□ -1.69
VSX2P58304 AC137768.1-201ENST00000549998 553 ntBASIC4.52□□□□□ -1.69
VSX2P58304 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.52□□□□□ -1.69
VSX2P58304 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.52□□□□□ -1.69
VSX2P58304 RN7SL652P-201ENST00000577769 300 ntBASIC4.52□□□□□ -1.69
VSX2P58304 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.52□□□□□ -1.69
VSX2P58304 AC073137.1-201ENST00000605636 634 ntBASIC4.52□□□□□ -1.69
VSX2P58304 NAMPTP1-201ENST00000440465 2514 ntBASIC4.52□□□□□ -1.69
VSX2P58304 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.52□□□□□ -1.69
VSX2P58304 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.52□□□□□ -1.69
VSX2P58304 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
VSX2P58304 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
VSX2P58304 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
VSX2P58304 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VSX2P58304 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VSX2P58304 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VSX2P58304 SCN1A-220ENST00000641603 12506 ntBASIC4.51□□□□□ -1.69
VSX2P58304 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
VSX2P58304 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
VSX2P58304 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC4.51□□□□□ -1.69
VSX2P58304 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VSX2P58304 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VSX2P58304 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VSX2P58304 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
VSX2P58304 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
VSX2P58304 RPS16P5-201ENST00000406501 404 ntBASIC4.51□□□□□ -1.69
VSX2P58304 AL356968.2-201ENST00000412769 1257 ntBASIC4.51□□□□□ -1.69
VSX2P58304 AL590139.1-201ENST00000416267 400 ntBASIC4.51□□□□□ -1.69
VSX2P58304 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.51□□□□□ -1.69
VSX2P58304 CYCSP11-201ENST00000436426 315 ntBASIC4.51□□□□□ -1.69
VSX2P58304 AC004938.1-201ENST00000438468 308 ntBASIC4.51□□□□□ -1.69
VSX2P58304 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.51□□□□□ -1.69
VSX2P58304 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.51□□□□□ -1.69
VSX2P58304 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VSX2P58304 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.51□□□□□ -1.69
VSX2P58304 RN7SL354P-201ENST00000469282 294 ntBASIC4.51□□□□□ -1.69
VSX2P58304 RPL23AP72-201ENST00000492447 435 ntBASIC4.51□□□□□ -1.69
VSX2P58304 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VSX2P58304 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.51□□□□□ -1.69
VSX2P58304 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.51□□□□□ -1.69
VSX2P58304 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.51□□□□□ -1.69
VSX2P58304 HNRNPRP2-201ENST00000528421 743 ntBASIC4.51□□□□□ -1.69
VSX2P58304 AP006289.1-201ENST00000538089 277 ntBASIC4.51□□□□□ -1.69
VSX2P58304 FKBP1BP1-201ENST00000553366 325 ntBASIC4.51□□□□□ -1.69
VSX2P58304 AL110118.1-201ENST00000553543 400 ntBASIC4.51□□□□□ -1.69
VSX2P58304 AC018552.1-201ENST00000562099 811 ntBASIC4.51□□□□□ -1.69
VSX2P58304 AL353600.1-201ENST00000608148 251 ntBASIC4.51□□□□□ -1.69
VSX2P58304 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.51□□□□□ -1.69
VSX2P58304 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.51□□□□□ -1.69
VSX2P58304 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.51□□□□□ -1.69
VSX2P58304 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.51□□□□□ -1.69
VSX2P58304 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VSX2P58304 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VSX2P58304 AL034370.1-201ENST00000397254 1590 ntBASIC4.51□□□□□ -1.69
VSX2P58304 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.51□□□□□ -1.69
VSX2P58304 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
VSX2P58304 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VSX2P58304 AC093775.1-201ENST00000624154 1868 ntBASIC4.51□□□□□ -1.69
VSX2P58304 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.51□□□□□ -1.69
VSX2P58304 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VSX2P58304 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
VSX2P58304 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
VSX2P58304 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VSX2P58304 AL672167.1-205ENST00000641112 3080 ntBASIC4.5□□□□□ -1.69
VSX2P58304 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VSX2P58304 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.5□□□□□ -1.69
VSX2P58304 SNORA56-201ENST00000383966 129 ntBASIC4.5□□□□□ -1.69
VSX2P58304 RN7SKP199-201ENST00000410325 305 ntBASIC4.5□□□□□ -1.69
VSX2P58304 RPL26P29-201ENST00000415623 438 ntBASIC4.5□□□□□ -1.69
VSX2P58304 ATG4AP1-201ENST00000416893 538 ntBASIC4.5□□□□□ -1.69
VSX2P58304 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.5□□□□□ -1.69
VSX2P58304 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.5□□□□□ -1.69
VSX2P58304 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.5□□□□□ -1.69
VSX2P58304 EIF4HP2-201ENST00000424380 563 ntBASIC4.5□□□□□ -1.69
VSX2P58304 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.5□□□□□ -1.69
VSX2P58304 AC097523.2-201ENST00000435551 652 ntBASIC4.5□□□□□ -1.69
VSX2P58304 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.5□□□□□ -1.69
VSX2P58304 CEACAMP9-201ENST00000442990 513 ntBASIC4.5□□□□□ -1.69
VSX2P58304 H2AFZP5-201ENST00000446960 382 ntBASIC4.5□□□□□ -1.69
VSX2P58304 THAP12P8-201ENST00000447914 2115 ntBASIC4.5□□□□□ -1.69
VSX2P58304 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.5□□□□□ -1.69
VSX2P58304 AC010326.1-201ENST00000462726 602 ntBASIC4.5□□□□□ -1.69
VSX2P58304 RN7SL205P-201ENST00000490174 284 ntBASIC4.5□□□□□ -1.69
VSX2P58304 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.5□□□□□ -1.69
VSX2P58304 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.5□□□□□ -1.69
VSX2P58304 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.5□□□□□ -1.69
VSX2P58304 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
VSX2P58304 OR5M2P-201ENST00000529003 936 ntBASIC4.5□□□□□ -1.69
VSX2P58304 HIGD1AP5-201ENST00000529959 259 ntBASIC4.5□□□□□ -1.69
VSX2P58304 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.5□□□□□ -1.69
VSX2P58304 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.5□□□□□ -1.69
VSX2P58304 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.5□□□□□ -1.69
VSX2P58304 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms