Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.47□□□□□ -1.69
LIM2P55344 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.47□□□□□ -1.69
LIM2P55344 REREP1Y-201ENST00000422655 198 ntBASIC4.47□□□□□ -1.69
LIM2P55344 RPL7P57-201ENST00000423238 740 ntBASIC4.47□□□□□ -1.69
LIM2P55344 NPM1P26-201ENST00000426339 738 ntBASIC4.47□□□□□ -1.69
LIM2P55344 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.47□□□□□ -1.69
LIM2P55344 MTCO1P57-201ENST00000432182 261 ntBASIC4.47□□□□□ -1.69
LIM2P55344 REREP2Y-201ENST00000439103 200 ntBASIC4.47□□□□□ -1.69
LIM2P55344 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.47□□□□□ -1.69
LIM2P55344 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LIM2P55344 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.47□□□□□ -1.69
LIM2P55344 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.47□□□□□ -1.69
LIM2P55344 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.47□□□□□ -1.69
LIM2P55344 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.47□□□□□ -1.69
LIM2P55344 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.47□□□□□ -1.69
LIM2P55344 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.47□□□□□ -1.69
LIM2P55344 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.47□□□□□ -1.69
LIM2P55344 MIR4480-201ENST00000582492 71 ntBASIC4.47□□□□□ -1.69
LIM2P55344 AL133406.3-201ENST00000606817 541 ntBASIC4.47□□□□□ -1.69
LIM2P55344 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.47□□□□□ -1.69
LIM2P55344 MIR6853-201ENST00000619642 74 ntBASIC4.47□□□□□ -1.69
LIM2P55344 MIR6730-201ENST00000622213 67 ntBASIC4.47□□□□□ -1.69
LIM2P55344 AP001784.1-201ENST00000624107 428 ntBASIC4.47□□□□□ -1.69
LIM2P55344 AC011815.3-201ENST00000624194 473 ntBASIC4.47□□□□□ -1.69
LIM2P55344 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.47□□□□□ -1.69
LIM2P55344 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.47□□□□□ -1.69
LIM2P55344 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.47□□□□□ -1.69
LIM2P55344 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.47□□□□□ -1.69
LIM2P55344 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LIM2P55344 AC093591.2-201ENST00000565254 3843 ntBASIC4.47□□□□□ -1.69
LIM2P55344 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LIM2P55344 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
LIM2P55344 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
LIM2P55344 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.69
LIM2P55344 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
LIM2P55344 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LIM2P55344 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LIM2P55344 AC006484.1-201ENST00000435086 1884 ntBASIC4.46□□□□□ -1.7
LIM2P55344 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.46□□□□□ -1.7
LIM2P55344 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.46□□□□□ -1.7
LIM2P55344 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LIM2P55344 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
LIM2P55344 RN7SKP103-201ENST00000363848 320 ntBASIC4.46□□□□□ -1.7
LIM2P55344 AC083799.1-201ENST00000366451 910 ntBASIC4.46□□□□□ -1.7
LIM2P55344 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LIM2P55344 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
LIM2P55344 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.46□□□□□ -1.7
LIM2P55344 OR51B3P-201ENST00000412287 913 ntBASIC4.46□□□□□ -1.7
LIM2P55344 FABP7P1-201ENST00000424004 391 ntBASIC4.46□□□□□ -1.7
LIM2P55344 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.46□□□□□ -1.7
LIM2P55344 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.46□□□□□ -1.7
LIM2P55344 NDUFA5P1-201ENST00000433858 341 ntBASIC4.46□□□□□ -1.7
LIM2P55344 AC006466.1-201ENST00000438721 289 ntBASIC4.46□□□□□ -1.7
LIM2P55344 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.46□□□□□ -1.7
LIM2P55344 CCRL1P1-201ENST00000449542 1053 ntBASIC4.46□□□□□ -1.7
LIM2P55344 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.46□□□□□ -1.7
LIM2P55344 AC104997.1-201ENST00000519761 717 ntBASIC4.46□□□□□ -1.7
LIM2P55344 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.46□□□□□ -1.7
LIM2P55344 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.46□□□□□ -1.7
LIM2P55344 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.46□□□□□ -1.7
LIM2P55344 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.46□□□□□ -1.7
LIM2P55344 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.46□□□□□ -1.7
LIM2P55344 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.46□□□□□ -1.7
LIM2P55344 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.46□□□□□ -1.7
LIM2P55344 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.46□□□□□ -1.7
LIM2P55344 AC073137.1-201ENST00000605636 634 ntBASIC4.46□□□□□ -1.7
LIM2P55344 AC012213.4-201ENST00000606457 354 ntBASIC4.46□□□□□ -1.7
LIM2P55344 OR7A19P-201ENST00000608051 733 ntBASIC4.46□□□□□ -1.7
LIM2P55344 Mico1.1-201ENST00000611698 204 ntBASIC4.46□□□□□ -1.7
LIM2P55344 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.46□□□□□ -1.7
LIM2P55344 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.46□□□□□ -1.7
LIM2P55344 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.46□□□□□ -1.7
LIM2P55344 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LIM2P55344 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
LIM2P55344 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
LIM2P55344 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LIM2P55344 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LIM2P55344 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
LIM2P55344 RBPJP2-201ENST00000618187 1444 ntBASIC4.46□□□□□ -1.7
LIM2P55344 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LIM2P55344 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
LIM2P55344 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.45□□□□□ -1.7
LIM2P55344 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.45□□□□□ -1.7
LIM2P55344 AC097063.1-201ENST00000426714 1797 ntBASIC4.45□□□□□ -1.7
LIM2P55344 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LIM2P55344 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.45□□□□□ -1.7
LIM2P55344 AL136164.3-201ENST00000624429 3978 ntBASIC4.45□□□□□ -1.7
LIM2P55344 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
LIM2P55344 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LIM2P55344 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LIM2P55344 RNA5SP105-201ENST00000391123 113 ntBASIC4.45□□□□□ -1.7
LIM2P55344 AL035419.1-201ENST00000397037 564 ntBASIC4.45□□□□□ -1.7
LIM2P55344 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
LIM2P55344 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.45□□□□□ -1.7
LIM2P55344 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.45□□□□□ -1.7
LIM2P55344 AL049745.1-201ENST00000433953 286 ntBASIC4.45□□□□□ -1.7
LIM2P55344 AC016831.4-201ENST00000438302 307 ntBASIC4.45□□□□□ -1.7
LIM2P55344 RPS26P2-201ENST00000440331 348 ntBASIC4.45□□□□□ -1.7
LIM2P55344 TXNP2-201ENST00000443918 295 ntBASIC4.45□□□□□ -1.7
LIM2P55344 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms