Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AC104164.2-201ENST00000496953 495 ntBASIC4.77□□□□□ -1.65
BRCA2P51587 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.77□□□□□ -1.65
BRCA2P51587 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.77□□□□□ -1.65
BRCA2P51587 PRPF19P1-201ENST00000584766 898 ntBASIC4.77□□□□□ -1.65
BRCA2P51587 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
BRCA2P51587 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
BRCA2P51587 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
BRCA2P51587 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC4.77□□□□□ -1.65
BRCA2P51587 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
BRCA2P51587 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
BRCA2P51587 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.77□□□□□ -1.65
BRCA2P51587 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
BRCA2P51587 RNA5SP22-201ENST00000365393 109 ntBASIC4.76□□□□□ -1.65
BRCA2P51587 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
BRCA2P51587 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.76□□□□□ -1.65
BRCA2P51587 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.76□□□□□ -1.65
BRCA2P51587 RPS20P4-201ENST00000461659 355 ntBASIC4.76□□□□□ -1.65
BRCA2P51587 RPL6P9-201ENST00000466502 859 ntBASIC4.76□□□□□ -1.65
BRCA2P51587 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.76□□□□□ -1.65
BRCA2P51587 IGKV2D-19-201ENST00000523346 262 ntBASIC4.76□□□□□ -1.65
BRCA2P51587 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
BRCA2P51587 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
BRCA2P51587 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
BRCA2P51587 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
BRCA2P51587 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
BRCA2P51587 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.76□□□□□ -1.65
BRCA2P51587 AC139769.1-204ENST00000472297 1931 ntBASIC4.76□□□□□ -1.65
BRCA2P51587 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
BRCA2P51587 CASC19-204ENST00000641001 2055 ntBASIC4.76□□□□□ -1.65
BRCA2P51587 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
BRCA2P51587 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
BRCA2P51587 OR6C71P-201ENST00000432580 913 ntBASIC4.76□□□□□ -1.65
BRCA2P51587 FP325313.1-201ENST00000638228 703 ntBASIC4.76□□□□□ -1.65
BRCA2P51587 LINC01808-202ENST00000641680 1116 ntBASIC4.76□□□□□ -1.65
BRCA2P51587 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
BRCA2P51587 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
BRCA2P51587 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.76□□□□□ -1.65
BRCA2P51587 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
BRCA2P51587 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC4.76□□□□□ -1.65
BRCA2P51587 VN1R51P-201ENST00000411675 945 ntBASIC4.76□□□□□ -1.65
BRCA2P51587 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.76□□□□□ -1.65
BRCA2P51587 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.76□□□□□ -1.65
BRCA2P51587 GAPDHP36-201ENST00000480688 918 ntBASIC4.76□□□□□ -1.65
BRCA2P51587 AC098799.1-201ENST00000504752 800 ntBASIC4.76□□□□□ -1.65
BRCA2P51587 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.76□□□□□ -1.65
BRCA2P51587 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
BRCA2P51587 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
BRCA2P51587 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.75□□□□□ -1.65
BRCA2P51587 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.75□□□□□ -1.65
BRCA2P51587 RNU1-83P-201ENST00000363426 164 ntBASIC4.75□□□□□ -1.65
BRCA2P51587 OR4F13P-201ENST00000428478 931 ntBASIC4.75□□□□□ -1.65
BRCA2P51587 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.75□□□□□ -1.65
BRCA2P51587 RPL7P4-203ENST00000430239 730 ntBASIC4.75□□□□□ -1.65
BRCA2P51587 RPL7P9-201ENST00000468715 747 ntBASIC4.75□□□□□ -1.65
BRCA2P51587 AL049873.1-201ENST00000480540 376 ntBASIC4.75□□□□□ -1.65
BRCA2P51587 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.75□□□□□ -1.65
BRCA2P51587 AP000756.2-201ENST00000624168 2567 ntBASIC4.75□□□□□ -1.65
BRCA2P51587 BCLAF3-203ENST00000379687 6528 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
BRCA2P51587 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.75□□□□□ -1.65
BRCA2P51587 PAX6-209ENST00000419022 6888 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
BRCA2P51587 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.75□□□□□ -1.65
BRCA2P51587 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
BRCA2P51587 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
BRCA2P51587 BX276092.6-201ENST00000430476 250 ntBASIC4.75□□□□□ -1.65
BRCA2P51587 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.75□□□□□ -1.65
BRCA2P51587 BX276092.8-201ENST00000455722 250 ntBASIC4.75□□□□□ -1.65
BRCA2P51587 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.75□□□□□ -1.65
BRCA2P51587 AF213884.1-201ENST00000488102 463 ntBASIC4.75□□□□□ -1.65
BRCA2P51587 RN7SL323P-201ENST00000494712 295 ntBASIC4.75□□□□□ -1.65
BRCA2P51587 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.75□□□□□ -1.65
BRCA2P51587 FP236240.3-201ENST00000623061 327 ntBASIC4.75□□□□□ -1.65
BRCA2P51587 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
BRCA2P51587 AL117378.2-201ENST00000622916 1337 ntBASIC4.75□□□□□ -1.65
BRCA2P51587 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
BRCA2P51587 MTND5P1-201ENST00000445440 1375 ntBASIC4.75□□□□□ -1.65
BRCA2P51587 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.75□□□□□ -1.65
BRCA2P51587 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.75□□□□□ -1.65
BRCA2P51587 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC4.75□□□□□ -1.65
BRCA2P51587 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC4.75□□□□□ -1.65
BRCA2P51587 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
BRCA2P51587 LINC02035-201ENST00000610128 5476 ntBASIC4.75□□□□□ -1.65
BRCA2P51587 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
BRCA2P51587 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
BRCA2P51587 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
BRCA2P51587 AL603766.1-201ENST00000407763 664 ntBASIC4.75□□□□□ -1.65
BRCA2P51587 AL356968.2-201ENST00000412769 1257 ntBASIC4.75□□□□□ -1.65
BRCA2P51587 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC4.75□□□□□ -1.65
BRCA2P51587 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.75□□□□□ -1.65
BRCA2P51587 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.75□□□□□ -1.65
BRCA2P51587 AL133244.1-201ENST00000456007 258 ntBASIC4.75□□□□□ -1.65
BRCA2P51587 AC099522.1-202ENST00000514718 367 ntBASIC4.75□□□□□ -1.65
BRCA2P51587 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC4.75□□□□□ -1.65
BRCA2P51587 CASC19-206ENST00000641028 1430 ntBASIC4.75□□□□□ -1.65
BRCA2P51587 CASC19-261ENST00000641853 1638 ntBASIC4.75□□□□□ -1.65
BRCA2P51587 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
BRCA2P51587 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
BRCA2P51587 TRIM51GP-201ENST00000534741 1350 ntBASIC4.74□□□□□ -1.65
BRCA2P51587 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC4.74□□□□□ -1.65
BRCA2P51587 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.74□□□□□ -1.65
BRCA2P51587 RPL21P67-201ENST00000402896 478 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms