Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.45□□□□□ -1.7
RFC3P40938 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
RFC3P40938 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RFC3P40938 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
RFC3P40938 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.45□□□□□ -1.7
RFC3P40938 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.45□□□□□ -1.7
RFC3P40938 AC007738.1-201ENST00000413892 348 ntBASIC4.45□□□□□ -1.7
RFC3P40938 PCNPP4-201ENST00000414817 517 ntBASIC4.45□□□□□ -1.7
RFC3P40938 AL590139.1-201ENST00000416267 400 ntBASIC4.45□□□□□ -1.7
RFC3P40938 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.45□□□□□ -1.7
RFC3P40938 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.45□□□□□ -1.7
RFC3P40938 RPL36AP15-201ENST00000444514 266 ntBASIC4.45□□□□□ -1.7
RFC3P40938 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.45□□□□□ -1.7
RFC3P40938 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.45□□□□□ -1.7
RFC3P40938 AC009220.1-201ENST00000451614 275 ntBASIC4.45□□□□□ -1.7
RFC3P40938 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.45□□□□□ -1.7
RFC3P40938 AURKAPS2-201ENST00000454983 333 ntBASIC4.45□□□□□ -1.7
RFC3P40938 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.45□□□□□ -1.7
RFC3P40938 EIF2S2P5-201ENST00000457635 968 ntBASIC4.45□□□□□ -1.7
RFC3P40938 AC113430.1-201ENST00000506872 718 ntBASIC4.45□□□□□ -1.7
RFC3P40938 RNU4-18P-201ENST00000516751 149 ntBASIC4.45□□□□□ -1.7
RFC3P40938 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.45□□□□□ -1.7
RFC3P40938 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.45□□□□□ -1.7
RFC3P40938 GSTP1P1-201ENST00000548078 319 ntBASIC4.45□□□□□ -1.7
RFC3P40938 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.45□□□□□ -1.7
RFC3P40938 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.45□□□□□ -1.7
RFC3P40938 AL049839.1-201ENST00000556151 657 ntBASIC4.45□□□□□ -1.7
RFC3P40938 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.45□□□□□ -1.7
RFC3P40938 AC079298.2-201ENST00000623885 459 ntBASIC4.45□□□□□ -1.7
RFC3P40938 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RFC3P40938 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RFC3P40938 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.45□□□□□ -1.7
RFC3P40938 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RFC3P40938 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RFC3P40938 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
RFC3P40938 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RFC3P40938 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.45□□□□□ -1.7
RFC3P40938 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RFC3P40938 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RFC3P40938 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RFC3P40938 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.44□□□□□ -1.7
RFC3P40938 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RFC3P40938 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RFC3P40938 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RFC3P40938 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
RFC3P40938 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.44□□□□□ -1.7
RFC3P40938 MAPK10-263ENST00000641052 4307 ntBASIC4.44□□□□□ -1.7
RFC3P40938 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.44□□□□□ -1.7
RFC3P40938 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.44□□□□□ -1.7
RFC3P40938 DDX18P4-201ENST00000511690 1966 ntBASIC4.44□□□□□ -1.7
RFC3P40938 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RFC3P40938 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RFC3P40938 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RFC3P40938 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RFC3P40938 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.44□□□□□ -1.7
RFC3P40938 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
RFC3P40938 AL592182.3-201ENST00000642132 3304 ntBASIC4.44□□□□□ -1.7
RFC3P40938 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RFC3P40938 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RFC3P40938 MIR141-201ENST00000384975 95 ntBASIC4.44□□□□□ -1.7
RFC3P40938 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.44□□□□□ -1.7
RFC3P40938 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.44□□□□□ -1.7
RFC3P40938 OR51A6P-201ENST00000418680 1004 ntBASIC4.44□□□□□ -1.7
RFC3P40938 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.44□□□□□ -1.7
RFC3P40938 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.44□□□□□ -1.7
RFC3P40938 NIPA2P1-201ENST00000426223 976 ntBASIC4.44□□□□□ -1.7
RFC3P40938 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RFC3P40938 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.44□□□□□ -1.7
RFC3P40938 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.44□□□□□ -1.7
RFC3P40938 RPL7AP61-201ENST00000443410 636 ntBASIC4.44□□□□□ -1.7
RFC3P40938 AC011753.3-201ENST00000443436 406 ntBASIC4.44□□□□□ -1.7
RFC3P40938 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.44□□□□□ -1.7
RFC3P40938 HSPE1P22-201ENST00000456856 327 ntBASIC4.44□□□□□ -1.7
RFC3P40938 AC006967.1-201ENST00000467608 589 ntBASIC4.44□□□□□ -1.7
RFC3P40938 RPL12P20-201ENST00000475538 479 ntBASIC4.44□□□□□ -1.7
RFC3P40938 RN7SL441P-201ENST00000492388 296 ntBASIC4.44□□□□□ -1.7
RFC3P40938 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RFC3P40938 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.44□□□□□ -1.7
RFC3P40938 AC092593.2-201ENST00000513866 913 ntBASIC4.44□□□□□ -1.7
RFC3P40938 TCP11X3P-202ENST00000514289 1254 ntBASIC4.44□□□□□ -1.7
RFC3P40938 RNA5SP303-201ENST00000516192 130 ntBASIC4.44□□□□□ -1.7
RFC3P40938 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.44□□□□□ -1.7
RFC3P40938 AC022616.2-201ENST00000523185 300 ntBASIC4.44□□□□□ -1.7
RFC3P40938 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.44□□□□□ -1.7
RFC3P40938 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.44□□□□□ -1.7
RFC3P40938 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.44□□□□□ -1.7
RFC3P40938 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.44□□□□□ -1.7
RFC3P40938 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.44□□□□□ -1.7
RFC3P40938 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.44□□□□□ -1.7
RFC3P40938 AL391358.1-201ENST00000605342 190 ntBASIC4.44□□□□□ -1.7
RFC3P40938 FAM27B-201ENST00000610601 213 ntBASIC4.44□□□□□ -1.7
RFC3P40938 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
RFC3P40938 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.44□□□□□ -1.7
RFC3P40938 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RFC3P40938 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RFC3P40938 AC104118.1-201ENST00000607625 1589 ntBASIC4.44□□□□□ -1.7
RFC3P40938 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.44□□□□□ -1.7
RFC3P40938 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RFC3P40938 SCN1A-220ENST00000641603 12506 ntBASIC4.44□□□□□ -1.7
RFC3P40938 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms