Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
CNGA1P29973 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.39□□□□□ -1.39
CNGA1P29973 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CNGA1P29973 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.39□□□□□ -1.39
CNGA1P29973 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
CNGA1P29973 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CNGA1P29973 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CNGA1P29973 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CNGA1P29973 AC004656.1-201ENST00000568479 4951 ntBASIC6.38□□□□□ -1.39
CNGA1P29973 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
CNGA1P29973 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CNGA1P29973 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.38□□□□□ -1.39
CNGA1P29973 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CNGA1P29973 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CNGA1P29973 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CNGA1P29973 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CNGA1P29973 GTF2IP2-201ENST00000424290 697 ntBASIC6.38□□□□□ -1.39
CNGA1P29973 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC6.38□□□□□ -1.39
CNGA1P29973 AP001324.1-201ENST00000428553 399 ntBASIC6.38□□□□□ -1.39
CNGA1P29973 AC005033.1-201ENST00000428904 813 ntBASIC6.38□□□□□ -1.39
CNGA1P29973 AC084290.1-201ENST00000434995 374 ntBASIC6.38□□□□□ -1.39
CNGA1P29973 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC6.38□□□□□ -1.39
CNGA1P29973 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC6.38□□□□□ -1.39
CNGA1P29973 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC6.38□□□□□ -1.39
CNGA1P29973 SEPT7P3-201ENST00000455017 621 ntBASIC6.38□□□□□ -1.39
CNGA1P29973 HMGB1P4-201ENST00000455362 567 ntBASIC6.38□□□□□ -1.39
CNGA1P29973 AC093166.2-201ENST00000455969 1017 ntBASIC6.38□□□□□ -1.39
CNGA1P29973 RPL23AP37-201ENST00000479658 549 ntBASIC6.38□□□□□ -1.39
CNGA1P29973 AC026782.2-201ENST00000510845 636 ntBASIC6.38□□□□□ -1.39
CNGA1P29973 RN7SKP66-201ENST00000516681 231 ntBASIC6.38□□□□□ -1.39
CNGA1P29973 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC6.38□□□□□ -1.39
CNGA1P29973 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.38□□□□□ -1.39
CNGA1P29973 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC6.38□□□□□ -1.39
CNGA1P29973 AC022832.1-201ENST00000530718 645 ntBASIC6.38□□□□□ -1.39
CNGA1P29973 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC6.38□□□□□ -1.39
CNGA1P29973 AL121594.2-201ENST00000541658 472 ntBASIC6.38□□□□□ -1.39
CNGA1P29973 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC6.38□□□□□ -1.39
CNGA1P29973 AC012616.1-201ENST00000600294 197 ntBASIC6.38□□□□□ -1.39
CNGA1P29973 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC6.38□□□□□ -1.39
CNGA1P29973 AC004908.3-201ENST00000610248 625 ntBASIC6.38□□□□□ -1.39
CNGA1P29973 AC009237.15-201ENST00000610252 501 ntBASIC6.38□□□□□ -1.39
CNGA1P29973 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
CNGA1P29973 VN1R74P-201ENST00000613259 503 ntBASIC6.38□□□□□ -1.39
CNGA1P29973 AC100827.5-201ENST00000615883 426 ntBASIC6.38□□□□□ -1.39
CNGA1P29973 AL355493.4-201ENST00000618530 292 ntBASIC6.38□□□□□ -1.39
CNGA1P29973 Z99129.2-201ENST00000619967 314 ntBASIC6.38□□□□□ -1.39
CNGA1P29973 AC109454.4-201ENST00000623411 649 ntBASIC6.38□□□□□ -1.39
CNGA1P29973 OR1S1-201ENST00000624470 978 ntBASIC6.38□□□□□ -1.39
CNGA1P29973 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CNGA1P29973 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CNGA1P29973 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CNGA1P29973 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.38□□□□□ -1.39
CNGA1P29973 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.38□□□□□ -1.39
CNGA1P29973 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
CNGA1P29973 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.38□□□□□ -1.39
CNGA1P29973 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CNGA1P29973 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CNGA1P29973 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.37□□□□□ -1.39
CNGA1P29973 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CNGA1P29973 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CNGA1P29973 AL355488.2-201ENST00000609909 2850 ntBASIC6.37□□□□□ -1.39
CNGA1P29973 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CNGA1P29973 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.37□□□□□ -1.39
CNGA1P29973 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
CNGA1P29973 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CNGA1P29973 RNA5SP183-201ENST00000362452 119 ntBASIC6.37□□□□□ -1.39
CNGA1P29973 RNA5SP30-201ENST00000365552 115 ntBASIC6.37□□□□□ -1.39
CNGA1P29973 RBMY2KP-201ENST00000418221 992 ntBASIC6.37□□□□□ -1.39
CNGA1P29973 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC6.37□□□□□ -1.39
CNGA1P29973 MTND2P16-201ENST00000419987 799 ntBASIC6.37□□□□□ -1.39
CNGA1P29973 AC005005.2-201ENST00000420779 380 ntBASIC6.37□□□□□ -1.39
CNGA1P29973 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC6.37□□□□□ -1.39
CNGA1P29973 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CNGA1P29973 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.37□□□□□ -1.39
CNGA1P29973 AC073410.1-201ENST00000435125 589 ntBASIC6.37□□□□□ -1.39
CNGA1P29973 AC006335.2-201ENST00000437993 330 ntBASIC6.37□□□□□ -1.39
CNGA1P29973 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC6.37□□□□□ -1.39
CNGA1P29973 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.37□□□□□ -1.39
CNGA1P29973 RPS26P30-201ENST00000443431 335 ntBASIC6.37□□□□□ -1.39
CNGA1P29973 H2AFZP6-201ENST00000444403 394 ntBASIC6.37□□□□□ -1.39
CNGA1P29973 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CNGA1P29973 AC099063.2-201ENST00000446360 662 ntBASIC6.37□□□□□ -1.39
CNGA1P29973 RNF148-202ENST00000447240 839 ntTSL 2 BASIC6.37□□□□□ -1.39
CNGA1P29973 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC6.37□□□□□ -1.39
CNGA1P29973 AC112492.1-201ENST00000449607 712 ntBASIC6.37□□□□□ -1.39
CNGA1P29973 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC6.37□□□□□ -1.39
CNGA1P29973 DNAJC19P8-201ENST00000452887 259 ntBASIC6.37□□□□□ -1.39
CNGA1P29973 RN7SL860P-201ENST00000473738 223 ntBASIC6.37□□□□□ -1.39
CNGA1P29973 TRBV8-2-201ENST00000475637 270 ntBASIC6.37□□□□□ -1.39
CNGA1P29973 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC6.37□□□□□ -1.39
CNGA1P29973 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.37□□□□□ -1.39
CNGA1P29973 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC6.37□□□□□ -1.39
CNGA1P29973 MTND2P38-201ENST00000522536 667 ntBASIC6.37□□□□□ -1.39
CNGA1P29973 MTCO3P15-201ENST00000526563 574 ntBASIC6.37□□□□□ -1.39
CNGA1P29973 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC6.37□□□□□ -1.39
CNGA1P29973 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC6.37□□□□□ -1.39
CNGA1P29973 YWHABP2-201ENST00000540201 713 ntBASIC6.37□□□□□ -1.39
CNGA1P29973 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC6.37□□□□□ -1.39
CNGA1P29973 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC6.37□□□□□ -1.39
CNGA1P29973 HSPE1P2-201ENST00000554777 306 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms