Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5□□□□□ -1.61
LDLRP01130 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC5□□□□□ -1.61
LDLRP01130 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5□□□□□ -1.61
LDLRP01130 AC078857.1-201ENST00000469870 667 ntBASIC5□□□□□ -1.61
LDLRP01130 AC083982.1-201ENST00000485679 344 ntBASIC5□□□□□ -1.61
LDLRP01130 RN7SL814P-201ENST00000487715 300 ntBASIC5□□□□□ -1.61
LDLRP01130 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5□□□□□ -1.61
LDLRP01130 AC110775.1-201ENST00000513721 462 ntBASIC5□□□□□ -1.61
LDLRP01130 AC034244.2-201ENST00000514668 858 ntBASIC5□□□□□ -1.61
LDLRP01130 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC5□□□□□ -1.61
LDLRP01130 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5□□□□□ -1.61
LDLRP01130 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5□□□□□ -1.61
LDLRP01130 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
LDLRP01130 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5□□□□□ -1.61
LDLRP01130 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5□□□□□ -1.61
LDLRP01130 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5□□□□□ -1.61
LDLRP01130 RN7SL435P-201ENST00000584418 282 ntBASIC5□□□□□ -1.61
LDLRP01130 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5□□□□□ -1.61
LDLRP01130 AP003117.1-201ENST00000602771 554 ntBASIC5□□□□□ -1.61
LDLRP01130 AC068313.1-201ENST00000604028 1008 ntBASIC5□□□□□ -1.61
LDLRP01130 AC120053.1-201ENST00000607706 736 ntBASIC5□□□□□ -1.61
LDLRP01130 MIR378J-201ENST00000611988 109 ntBASIC5□□□□□ -1.61
LDLRP01130 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
LDLRP01130 AL118522.2-201ENST00000616045 615 ntBASIC5□□□□□ -1.61
LDLRP01130 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5□□□□□ -1.61
LDLRP01130 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5□□□□□ -1.61
LDLRP01130 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5□□□□□ -1.61
LDLRP01130 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LDLRP01130 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5□□□□□ -1.61
LDLRP01130 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC5□□□□□ -1.61
LDLRP01130 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5□□□□□ -1.61
LDLRP01130 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.99□□□□□ -1.61
LDLRP01130 AL136520.1-201ENST00000600311 1322 ntBASIC4.99□□□□□ -1.61
LDLRP01130 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
LDLRP01130 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.99□□□□□ -1.61
LDLRP01130 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.61
LDLRP01130 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
LDLRP01130 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.99□□□□□ -1.61
LDLRP01130 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.99□□□□□ -1.61
LDLRP01130 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
LDLRP01130 MIR551A-201ENST00000385042 96 ntBASIC4.99□□□□□ -1.61
LDLRP01130 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LDLRP01130 AL078599.1-201ENST00000402075 293 ntBASIC4.99□□□□□ -1.61
LDLRP01130 RN7SKP16-201ENST00000410180 299 ntBASIC4.99□□□□□ -1.61
LDLRP01130 BTF3P9-201ENST00000418784 283 ntBASIC4.99□□□□□ -1.61
LDLRP01130 AC093162.1-201ENST00000419682 124 ntBASIC4.99□□□□□ -1.61
LDLRP01130 OR5M12P-201ENST00000423388 929 ntBASIC4.99□□□□□ -1.61
LDLRP01130 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC4.99□□□□□ -1.61
LDLRP01130 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.99□□□□□ -1.61
LDLRP01130 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.99□□□□□ -1.61
LDLRP01130 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LDLRP01130 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.99□□□□□ -1.61
LDLRP01130 RPL12P17-201ENST00000432393 498 ntBASIC4.99□□□□□ -1.61
LDLRP01130 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.99□□□□□ -1.61
LDLRP01130 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.99□□□□□ -1.61
LDLRP01130 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.99□□□□□ -1.61
LDLRP01130 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.99□□□□□ -1.61
LDLRP01130 RPL5P13-201ENST00000462840 709 ntBASIC4.99□□□□□ -1.61
LDLRP01130 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
LDLRP01130 AC092754.1-201ENST00000472975 479 ntBASIC4.99□□□□□ -1.61
LDLRP01130 RPL7P41-201ENST00000485823 957 ntBASIC4.99□□□□□ -1.61
LDLRP01130 AC092902.1-201ENST00000486999 259 ntBASIC4.99□□□□□ -1.61
LDLRP01130 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.99□□□□□ -1.61
LDLRP01130 RFPL4AP5-201ENST00000514977 504 ntBASIC4.99□□□□□ -1.61
LDLRP01130 RN7SKP99-201ENST00000517028 307 ntBASIC4.99□□□□□ -1.61
LDLRP01130 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.99□□□□□ -1.61
LDLRP01130 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.99□□□□□ -1.61
LDLRP01130 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.99□□□□□ -1.61
LDLRP01130 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.99□□□□□ -1.61
LDLRP01130 AP004607.2-201ENST00000533949 322 ntBASIC4.99□□□□□ -1.61
LDLRP01130 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.99□□□□□ -1.61
LDLRP01130 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.99□□□□□ -1.61
LDLRP01130 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.99□□□□□ -1.61
LDLRP01130 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.99□□□□□ -1.61
LDLRP01130 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.99□□□□□ -1.61
LDLRP01130 RN7SL356P-201ENST00000582228 248 ntBASIC4.99□□□□□ -1.61
LDLRP01130 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC4.99□□□□□ -1.61
LDLRP01130 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.99□□□□□ -1.61
LDLRP01130 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.99□□□□□ -1.61
LDLRP01130 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC4.99□□□□□ -1.61
LDLRP01130 AC015849.2-201ENST00000605738 409 ntBASIC4.99□□□□□ -1.61
LDLRP01130 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.99□□□□□ -1.61
LDLRP01130 AC004908.3-201ENST00000610248 625 ntBASIC4.99□□□□□ -1.61
LDLRP01130 uc_338.18-201ENST00000615451 175 ntBASIC4.99□□□□□ -1.61
LDLRP01130 AC245389.2-201ENST00000616023 576 ntBASIC4.99□□□□□ -1.61
LDLRP01130 AC242843.1-201ENST00000618702 573 ntBASIC4.99□□□□□ -1.61
LDLRP01130 AC097460.3-201ENST00000623099 442 ntBASIC4.99□□□□□ -1.61
LDLRP01130 AC092159.4-201ENST00000624944 550 ntBASIC4.99□□□□□ -1.61
LDLRP01130 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.99□□□□□ -1.61
LDLRP01130 LINC01739-205ENST00000641890 573 ntBASIC4.99□□□□□ -1.61
LDLRP01130 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LDLRP01130 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LDLRP01130 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
LDLRP01130 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LDLRP01130 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LDLRP01130 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LDLRP01130 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.99□□□□□ -1.61
LDLRP01130 AC012618.3-205ENST00000637896 1496 ntBASIC4.99□□□□□ -1.61
LDLRP01130 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
LDLRP01130 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms