Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
FOXN3O00409 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
FOXN3O00409 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
FOXN3O00409 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
FOXN3O00409 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
FOXN3O00409 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.7□□□□□ -1.5
FOXN3O00409 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
FOXN3O00409 AC093311.1-201ENST00000506586 2021 ntBASIC5.7□□□□□ -1.5
FOXN3O00409 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.7□□□□□ -1.5
FOXN3O00409 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
FOXN3O00409 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
FOXN3O00409 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
FOXN3O00409 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
FOXN3O00409 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.7□□□□□ -1.5
FOXN3O00409 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
FOXN3O00409 UBE2Q2P1-202ENST00000354771 883 ntBASIC5.7□□□□□ -1.5
FOXN3O00409 RNU6-543P-201ENST00000362576 108 ntBASIC5.7□□□□□ -1.5
FOXN3O00409 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.7□□□□□ -1.5
FOXN3O00409 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.7□□□□□ -1.5
FOXN3O00409 RNU6-225P-201ENST00000384613 103 ntBASIC5.7□□□□□ -1.5
FOXN3O00409 RN7SKP293-201ENST00000411389 296 ntBASIC5.7□□□□□ -1.5
FOXN3O00409 TAF13P2-201ENST00000416876 286 ntBASIC5.7□□□□□ -1.5
FOXN3O00409 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.7□□□□□ -1.5
FOXN3O00409 USP9YP21-201ENST00000420603 432 ntBASIC5.7□□□□□ -1.5
FOXN3O00409 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.7□□□□□ -1.5
FOXN3O00409 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.7□□□□□ -1.5
FOXN3O00409 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC5.7□□□□□ -1.5
FOXN3O00409 AP000936.3-201ENST00000438127 255 ntBASIC5.7□□□□□ -1.5
FOXN3O00409 AL358794.1-201ENST00000445689 381 ntBASIC5.7□□□□□ -1.5
FOXN3O00409 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.7□□□□□ -1.5
FOXN3O00409 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.7□□□□□ -1.5
FOXN3O00409 OR52E3P-201ENST00000452083 936 ntBASIC5.7□□□□□ -1.5
FOXN3O00409 AC092155.2-201ENST00000454675 477 ntBASIC5.7□□□□□ -1.5
FOXN3O00409 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.7□□□□□ -1.5
FOXN3O00409 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.7□□□□□ -1.5
FOXN3O00409 AC100832.1-201ENST00000471945 383 ntBASIC5.7□□□□□ -1.5
FOXN3O00409 RPL7P41-201ENST00000485823 957 ntBASIC5.7□□□□□ -1.5
FOXN3O00409 AC093890.1-201ENST00000502554 540 ntBASIC5.7□□□□□ -1.5
FOXN3O00409 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.7□□□□□ -1.5
FOXN3O00409 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.7□□□□□ -1.5
FOXN3O00409 AC113420.1-201ENST00000507903 571 ntBASIC5.7□□□□□ -1.5
FOXN3O00409 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC5.7□□□□□ -1.5
FOXN3O00409 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.7□□□□□ -1.5
FOXN3O00409 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC5.7□□□□□ -1.5
FOXN3O00409 AC022360.1-201ENST00000521058 340 ntBASIC5.7□□□□□ -1.5
FOXN3O00409 NDUFS5P6-201ENST00000529136 295 ntBASIC5.7□□□□□ -1.5
FOXN3O00409 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC5.7□□□□□ -1.5
FOXN3O00409 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC5.7□□□□□ -1.5
FOXN3O00409 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.7□□□□□ -1.5
FOXN3O00409 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC5.7□□□□□ -1.5
FOXN3O00409 SNORD95-201ENST00000579879 68 ntBASIC5.7□□□□□ -1.5
FOXN3O00409 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.7□□□□□ -1.5
FOXN3O00409 AC011626.1-201ENST00000604710 562 ntBASIC5.7□□□□□ -1.5
FOXN3O00409 AL022394.1-201ENST00000606979 292 ntBASIC5.7□□□□□ -1.5
FOXN3O00409 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.7□□□□□ -1.5
FOXN3O00409 AC140725.3-201ENST00000616193 880 ntBASIC5.7□□□□□ -1.5
FOXN3O00409 MIR6839-201ENST00000620425 113 ntBASIC5.7□□□□□ -1.5
FOXN3O00409 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.7□□□□□ -1.5
FOXN3O00409 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
FOXN3O00409 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
FOXN3O00409 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
FOXN3O00409 AC002525.1-201ENST00000624392 1622 ntBASIC5.7□□□□□ -1.5
FOXN3O00409 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
FOXN3O00409 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
FOXN3O00409 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.69□□□□□ -1.5
FOXN3O00409 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
FOXN3O00409 AC026523.2-201ENST00000625039 7739 ntBASIC5.69□□□□□ -1.5
FOXN3O00409 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
FOXN3O00409 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
FOXN3O00409 PCF11-AS1-201ENST00000602322 1516 ntBASIC5.69□□□□□ -1.5
FOXN3O00409 TCP11X1-202ENST00000622971 1372 ntBASIC5.69□□□□□ -1.5
FOXN3O00409 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
FOXN3O00409 MAPK10-338ENST00000641647 3362 ntBASIC5.69□□□□□ -1.5
FOXN3O00409 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.69□□□□□ -1.5
FOXN3O00409 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.69□□□□□ -1.5
FOXN3O00409 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.69□□□□□ -1.5
FOXN3O00409 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
FOXN3O00409 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.69□□□□□ -1.5
FOXN3O00409 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
FOXN3O00409 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
FOXN3O00409 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
FOXN3O00409 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.69□□□□□ -1.5
FOXN3O00409 HSPA8P15-201ENST00000401676 786 ntBASIC5.69□□□□□ -1.5
FOXN3O00409 MTATP6P20-201ENST00000414147 562 ntBASIC5.69□□□□□ -1.5
FOXN3O00409 AC048351.1-201ENST00000420064 602 ntBASIC5.69□□□□□ -1.5
FOXN3O00409 OR5M12P-201ENST00000423388 929 ntBASIC5.69□□□□□ -1.5
FOXN3O00409 AC092648.1-201ENST00000425870 423 ntBASIC5.69□□□□□ -1.5
FOXN3O00409 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.69□□□□□ -1.5
FOXN3O00409 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC5.69□□□□□ -1.5
FOXN3O00409 CASP3P1-201ENST00000446037 609 ntBASIC5.69□□□□□ -1.5
FOXN3O00409 AC005002.1-201ENST00000447458 540 ntBASIC5.69□□□□□ -1.5
FOXN3O00409 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.69□□□□□ -1.5
FOXN3O00409 RPL7L1P1-201ENST00000448259 785 ntBASIC5.69□□□□□ -1.5
FOXN3O00409 AC104634.1-201ENST00000452720 462 ntBASIC5.69□□□□□ -1.5
FOXN3O00409 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.69□□□□□ -1.5
FOXN3O00409 AC108161.1-201ENST00000461060 402 ntBASIC5.69□□□□□ -1.5
FOXN3O00409 RPL6P9-201ENST00000466502 859 ntBASIC5.69□□□□□ -1.5
FOXN3O00409 TRBV8-2-201ENST00000475637 270 ntBASIC5.69□□□□□ -1.5
FOXN3O00409 AC005412.2-201ENST00000492004 341 ntBASIC5.69□□□□□ -1.5
FOXN3O00409 RPS24P16-201ENST00000497294 392 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms