Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.4□□□□□ -1.38
CAPN6Q9Y6Q1 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC6.4□□□□□ -1.38
CAPN6Q9Y6Q1 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CAPN6Q9Y6Q1 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.4□□□□□ -1.38
CAPN6Q9Y6Q1 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.4□□□□□ -1.38
CAPN6Q9Y6Q1 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC6.4□□□□□ -1.38
CAPN6Q9Y6Q1 FGF7P1-201ENST00000582820 288 ntBASIC6.4□□□□□ -1.38
CAPN6Q9Y6Q1 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.4□□□□□ -1.38
CAPN6Q9Y6Q1 AC078795.3-201ENST00000602913 472 ntBASIC6.4□□□□□ -1.38
CAPN6Q9Y6Q1 AL390816.3-201ENST00000604527 1066 ntBASIC6.4□□□□□ -1.38
CAPN6Q9Y6Q1 NDUFB9P1-201ENST00000604683 510 ntBASIC6.4□□□□□ -1.38
CAPN6Q9Y6Q1 AC007038.2-201ENST00000608095 740 ntBASIC6.4□□□□□ -1.38
CAPN6Q9Y6Q1 AC092954.2-201ENST00000609103 430 ntBASIC6.4□□□□□ -1.38
CAPN6Q9Y6Q1 AC128687.2-201ENST00000609657 566 ntBASIC6.4□□□□□ -1.38
CAPN6Q9Y6Q1 AC004009.2-201ENST00000623016 728 ntBASIC6.4□□□□□ -1.38
CAPN6Q9Y6Q1 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.4□□□□□ -1.38
CAPN6Q9Y6Q1 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC6.4□□□□□ -1.38
CAPN6Q9Y6Q1 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CAPN6Q9Y6Q1 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.4□□□□□ -1.39
CAPN6Q9Y6Q1 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CAPN6Q9Y6Q1 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CAPN6Q9Y6Q1 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.4□□□□□ -1.39
CAPN6Q9Y6Q1 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CAPN6Q9Y6Q1 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.4□□□□□ -1.39
CAPN6Q9Y6Q1 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CAPN6Q9Y6Q1 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.4□□□□□ -1.39
CAPN6Q9Y6Q1 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.39
CAPN6Q9Y6Q1 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
CAPN6Q9Y6Q1 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 CASC19-246ENST00000641625 1606 ntBASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 AC130304.1-201ENST00000622942 2385 ntBASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 AL049634.1-201ENST00000453770 1720 ntBASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 AC004076.2-201ENST00000620532 3323 ntBASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 AC092646.2-201ENST00000431242 2095 ntBASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 METTL21EP-201ENST00000298105 713 ntBASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 MIR181A1-201ENST00000385026 110 ntBASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 MIR27A-201ENST00000385073 78 ntBASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 SNORD115-47-201ENST00000391226 86 ntBASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 RPL17P50-201ENST00000396131 546 ntBASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 NCSTNP1-201ENST00000406229 144 ntBASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 UBTFL3-201ENST00000418934 1024 ntBASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 AC245054.1-201ENST00000420944 258 ntBASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 RPS15AP30-201ENST00000420976 390 ntBASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 SLC44A3-AS1-205ENST00000424505 612 ntBASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 AC000111.3-201ENST00000433478 193 ntBASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 AC094019.1-201ENST00000434678 472 ntBASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 MTND4LP16-201ENST00000440828 295 ntBASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 AC004865.1-201ENST00000442276 1003 ntBASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 RPSAP40-201ENST00000442343 891 ntBASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 PAXBP1P1-201ENST00000449315 447 ntBASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 OR6C5P-201ENST00000452388 923 ntBASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 RPL5P24-201ENST00000463742 885 ntBASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 AC135999.1-201ENST00000478962 479 ntBASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 AC135983.3-201ENST00000528049 1226 ntBASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 AC126615.2-201ENST00000553003 515 ntBASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 AC015871.2-201ENST00000603605 948 ntBASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 AC012511.1-201ENST00000608140 449 ntBASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 AC006566.1-201ENST00000608943 513 ntBASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 AP005137.2-201ENST00000609238 400 ntBASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 Y_RNA.804-201ENST00000615262 101 ntBASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 AC009704.2-201ENST00000618739 483 ntBASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 SNX18P12-201ENST00000624821 759 ntBASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.39□□□□□ -1.39
CAPN6Q9Y6Q1 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms