Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC008638.1-201ENST00000506035 866 ntBASIC4.41□□□□□ -1.7
VPS29Q9UBQ0 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.41□□□□□ -1.7
VPS29Q9UBQ0 RN7SKP5-201ENST00000517045 272 ntBASIC4.41□□□□□ -1.7
VPS29Q9UBQ0 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.41□□□□□ -1.7
VPS29Q9UBQ0 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VPS29Q9UBQ0 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.41□□□□□ -1.7
VPS29Q9UBQ0 AC105129.1-201ENST00000560250 297 ntBASIC4.41□□□□□ -1.7
VPS29Q9UBQ0 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.41□□□□□ -1.7
VPS29Q9UBQ0 AC027455.1-201ENST00000574104 594 ntBASIC4.41□□□□□ -1.7
VPS29Q9UBQ0 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.41□□□□□ -1.7
VPS29Q9UBQ0 RPL7P50-201ENST00000600588 727 ntBASIC4.41□□□□□ -1.7
VPS29Q9UBQ0 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.41□□□□□ -1.7
VPS29Q9UBQ0 AC090510.2-201ENST00000617465 629 ntBASIC4.41□□□□□ -1.7
VPS29Q9UBQ0 MIR6853-201ENST00000619642 74 ntBASIC4.41□□□□□ -1.7
VPS29Q9UBQ0 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC4.41□□□□□ -1.7
VPS29Q9UBQ0 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.41□□□□□ -1.7
VPS29Q9UBQ0 AC131971.1-201ENST00000332881 1482 ntBASIC4.41□□□□□ -1.7
VPS29Q9UBQ0 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VPS29Q9UBQ0 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
VPS29Q9UBQ0 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.41□□□□□ -1.7
VPS29Q9UBQ0 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
VPS29Q9UBQ0 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.4□□□□□ -1.7
VPS29Q9UBQ0 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
VPS29Q9UBQ0 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.4□□□□□ -1.7
VPS29Q9UBQ0 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.7
VPS29Q9UBQ0 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
VPS29Q9UBQ0 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
VPS29Q9UBQ0 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
VPS29Q9UBQ0 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.4□□□□□ -1.7
VPS29Q9UBQ0 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
VPS29Q9UBQ0 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VPS29Q9UBQ0 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.4□□□□□ -1.71
VPS29Q9UBQ0 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS29Q9UBQ0 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
VPS29Q9UBQ0 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.4□□□□□ -1.71
VPS29Q9UBQ0 RN7SKP199-201ENST00000410325 305 ntBASIC4.4□□□□□ -1.71
VPS29Q9UBQ0 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.4□□□□□ -1.71
VPS29Q9UBQ0 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.4□□□□□ -1.71
VPS29Q9UBQ0 VN1R54P-201ENST00000435210 1049 ntBASIC4.4□□□□□ -1.71
VPS29Q9UBQ0 AC073648.4-201ENST00000442655 781 ntBASIC4.4□□□□□ -1.71
VPS29Q9UBQ0 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS29Q9UBQ0 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.4□□□□□ -1.71
VPS29Q9UBQ0 AC091685.2-201ENST00000454924 864 ntBASIC4.4□□□□□ -1.71
VPS29Q9UBQ0 ATP5G1P3-201ENST00000463301 410 ntBASIC4.4□□□□□ -1.71
VPS29Q9UBQ0 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.4□□□□□ -1.71
VPS29Q9UBQ0 NDUFB5P1-201ENST00000508134 564 ntBASIC4.4□□□□□ -1.71
VPS29Q9UBQ0 RNA5SP464-201ENST00000516251 108 ntBASIC4.4□□□□□ -1.71
VPS29Q9UBQ0 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS29Q9UBQ0 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.4□□□□□ -1.71
VPS29Q9UBQ0 AP001922.4-201ENST00000526967 290 ntBASIC4.4□□□□□ -1.71
VPS29Q9UBQ0 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
VPS29Q9UBQ0 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VPS29Q9UBQ0 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VPS29Q9UBQ0 GSTP1P1-201ENST00000548078 319 ntBASIC4.4□□□□□ -1.71
VPS29Q9UBQ0 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS29Q9UBQ0 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.4□□□□□ -1.71
VPS29Q9UBQ0 AC044860.2-201ENST00000561005 179 ntBASIC4.4□□□□□ -1.71
VPS29Q9UBQ0 AC010547.7-201ENST00000570323 333 ntBASIC4.4□□□□□ -1.71
VPS29Q9UBQ0 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
VPS29Q9UBQ0 MIR3934-201ENST00000579806 107 ntBASIC4.4□□□□□ -1.71
VPS29Q9UBQ0 MIR4737-201ENST00000583979 81 ntBASIC4.4□□□□□ -1.71
VPS29Q9UBQ0 ADAD1P2-201ENST00000588476 646 ntBASIC4.4□□□□□ -1.71
VPS29Q9UBQ0 AC023762.1-201ENST00000603280 584 ntBASIC4.4□□□□□ -1.71
VPS29Q9UBQ0 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC4.4□□□□□ -1.71
VPS29Q9UBQ0 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.4□□□□□ -1.71
VPS29Q9UBQ0 U3.53-201ENST00000628922 216 ntBASIC4.4□□□□□ -1.71
VPS29Q9UBQ0 AL355480.1-201ENST00000629041 99 ntBASIC4.4□□□□□ -1.71
VPS29Q9UBQ0 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
VPS29Q9UBQ0 ZNF137P-201ENST00000456718 1920 ntBASIC4.4□□□□□ -1.71
VPS29Q9UBQ0 AL929601.4-201ENST00000613011 1341 ntBASIC4.4□□□□□ -1.71
VPS29Q9UBQ0 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
VPS29Q9UBQ0 AC108467.2-201ENST00000617640 1597 ntBASIC4.4□□□□□ -1.71
VPS29Q9UBQ0 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.4□□□□□ -1.71
VPS29Q9UBQ0 AC132825.1-201ENST00000463573 2247 ntBASIC4.4□□□□□ -1.71
VPS29Q9UBQ0 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.39□□□□□ -1.71
VPS29Q9UBQ0 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
VPS29Q9UBQ0 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VPS29Q9UBQ0 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VPS29Q9UBQ0 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VPS29Q9UBQ0 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.39□□□□□ -1.71
VPS29Q9UBQ0 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VPS29Q9UBQ0 RNU1-20P-201ENST00000363314 162 ntBASIC4.39□□□□□ -1.71
VPS29Q9UBQ0 SNORA71.2-201ENST00000364941 134 ntBASIC4.39□□□□□ -1.71
VPS29Q9UBQ0 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VPS29Q9UBQ0 FCF1P5-201ENST00000406490 482 ntBASIC4.39□□□□□ -1.71
VPS29Q9UBQ0 AC009237.10-201ENST00000414112 510 ntBASIC4.39□□□□□ -1.71
VPS29Q9UBQ0 ATG4AP1-201ENST00000416893 538 ntBASIC4.39□□□□□ -1.71
VPS29Q9UBQ0 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.39□□□□□ -1.71
VPS29Q9UBQ0 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.39□□□□□ -1.71
VPS29Q9UBQ0 RPL23AP25-201ENST00000430973 463 ntBASIC4.39□□□□□ -1.71
VPS29Q9UBQ0 TMX2P1-201ENST00000436507 708 ntBASIC4.39□□□□□ -1.71
VPS29Q9UBQ0 PTMAP6-201ENST00000439110 327 ntBASIC4.39□□□□□ -1.71
VPS29Q9UBQ0 HIGD1AP8-201ENST00000453927 274 ntBASIC4.39□□□□□ -1.71
VPS29Q9UBQ0 RPL21P6-201ENST00000479171 504 ntBASIC4.39□□□□□ -1.71
VPS29Q9UBQ0 RN7SL817P-201ENST00000480777 288 ntBASIC4.39□□□□□ -1.71
VPS29Q9UBQ0 TCP11X3P-202ENST00000514289 1254 ntBASIC4.39□□□□□ -1.71
VPS29Q9UBQ0 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.39□□□□□ -1.71
VPS29Q9UBQ0 KCTD9P6-201ENST00000522306 950 ntBASIC4.39□□□□□ -1.71
VPS29Q9UBQ0 AC084759.1-201ENST00000561168 290 ntBASIC4.39□□□□□ -1.71
VPS29Q9UBQ0 AC124856.1-201ENST00000600819 896 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms