Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 RPL23AP72-201ENST00000492447 435 ntBASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 AGGF1P3-201ENST00000493675 1213 ntBASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 RNU2-30P-201ENST00000516209 141 ntBASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 OR10D4P-201ENST00000525892 951 ntBASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 AL159169.2-201ENST00000610061 1269 ntBASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 AC021242.1-201ENST00000507315 2035 ntBASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
CLCF1Q9UBD9 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 RNU6-249P-201ENST00000363016 102 ntBASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 AL672167.2-201ENST00000377164 879 ntBASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 RNU6-891P-201ENST00000384280 111 ntBASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 FAR2P2-201ENST00000413041 594 ntBASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 GLUD1P9-201ENST00000420997 1173 ntBASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 FAR2P4-202ENST00000425399 584 ntBASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 AL451139.1-201ENST00000434718 346 ntBASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 NDUFA12P1-201ENST00000455914 406 ntBASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 AC245028.2-201ENST00000458673 253 ntBASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 AC096741.1-201ENST00000472250 846 ntBASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 RPL12P20-201ENST00000475538 479 ntBASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 OR8A2P-201ENST00000528631 952 ntBASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 OR5M2P-201ENST00000529003 936 ntBASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 AL049830.4-201ENST00000555149 351 ntBASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 AC079075.1-201ENST00000559543 878 ntBASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 GMCL1P2-201ENST00000605230 823 ntBASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 AL590410.1-201ENST00000617925 333 ntBASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 RBPJP2-201ENST00000618187 1444 ntBASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 ZFRP1-201ENST00000457579 2970 ntBASIC4.26□□□□□ -1.73
CLCF1Q9UBD9 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLCF1Q9UBD9 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLCF1Q9UBD9 AC133552.1-201ENST00000569988 4007 ntBASIC4.25□□□□□ -1.73
CLCF1Q9UBD9 AC010132.2-201ENST00000295493 1043 ntBASIC4.25□□□□□ -1.73
CLCF1Q9UBD9 RNU4-23P-201ENST00000362839 140 ntBASIC4.25□□□□□ -1.73
CLCF1Q9UBD9 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CLCF1Q9UBD9 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLCF1Q9UBD9 OR13C3-201ENST00000374781 1108 ntBASIC4.25□□□□□ -1.73
CLCF1Q9UBD9 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.25□□□□□ -1.73
CLCF1Q9UBD9 RNU2-22P-201ENST00000411266 212 ntBASIC4.25□□□□□ -1.73
CLCF1Q9UBD9 CTSL3P-202ENST00000412179 788 ntBASIC4.25□□□□□ -1.73
CLCF1Q9UBD9 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.25□□□□□ -1.73
CLCF1Q9UBD9 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.25□□□□□ -1.73
CLCF1Q9UBD9 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.25□□□□□ -1.73
CLCF1Q9UBD9 AL392003.1-201ENST00000434394 243 ntBASIC4.25□□□□□ -1.73
CLCF1Q9UBD9 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.25□□□□□ -1.73
CLCF1Q9UBD9 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.25□□□□□ -1.73
CLCF1Q9UBD9 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.25□□□□□ -1.73
CLCF1Q9UBD9 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.25□□□□□ -1.73
CLCF1Q9UBD9 RN7SL354P-201ENST00000469282 294 ntBASIC4.25□□□□□ -1.73
CLCF1Q9UBD9 AC006463.2-201ENST00000473326 348 ntBASIC4.25□□□□□ -1.73
CLCF1Q9UBD9 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.25□□□□□ -1.73
CLCF1Q9UBD9 AC093890.1-201ENST00000502554 540 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms