Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 KLHL2P1-201ENST00000508691 521 ntBASIC7□□□□□ -1.29
CUEDC1Q9NWM3 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CUEDC1Q9NWM3 Y_RNA.691-201ENST00000516611 103 ntBASIC7□□□□□ -1.29
CUEDC1Q9NWM3 AC130366.1-201ENST00000526505 1192 ntBASIC7□□□□□ -1.29
CUEDC1Q9NWM3 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC7□□□□□ -1.29
CUEDC1Q9NWM3 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC7□□□□□ -1.29
CUEDC1Q9NWM3 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC7□□□□□ -1.29
CUEDC1Q9NWM3 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC7□□□□□ -1.29
CUEDC1Q9NWM3 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC7□□□□□ -1.29
CUEDC1Q9NWM3 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC7□□□□□ -1.29
CUEDC1Q9NWM3 AL136139.1-201ENST00000605568 222 ntBASIC7□□□□□ -1.29
CUEDC1Q9NWM3 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC7□□□□□ -1.29
CUEDC1Q9NWM3 uc_338.37-201ENST00000620113 186 ntBASIC7□□□□□ -1.29
CUEDC1Q9NWM3 AC007347.2-201ENST00000623044 180 ntBASIC7□□□□□ -1.29
CUEDC1Q9NWM3 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC7□□□□□ -1.29
CUEDC1Q9NWM3 AL049541.2-201ENST00000626377 555 ntBASIC7□□□□□ -1.29
CUEDC1Q9NWM3 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC7□□□□□ -1.29
CUEDC1Q9NWM3 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC7□□□□□ -1.29
CUEDC1Q9NWM3 AC073488.7-201ENST00000633785 778 ntBASIC7□□□□□ -1.29
CUEDC1Q9NWM3 AC006453.3-201ENST00000635891 377 ntBASIC7□□□□□ -1.29
CUEDC1Q9NWM3 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
CUEDC1Q9NWM3 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
CUEDC1Q9NWM3 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
CUEDC1Q9NWM3 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
CUEDC1Q9NWM3 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CUEDC1Q9NWM3 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
CUEDC1Q9NWM3 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC7□□□□□ -1.29
CUEDC1Q9NWM3 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
CUEDC1Q9NWM3 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CUEDC1Q9NWM3 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC7□□□□□ -1.29
CUEDC1Q9NWM3 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC7□□□□□ -1.29
CUEDC1Q9NWM3 NSF-206ENST00000575068 2667 ntTSL 2 BASIC7□□□□□ -1.29
CUEDC1Q9NWM3 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC7□□□□□ -1.29
CUEDC1Q9NWM3 AC092111.1-201ENST00000618256 3358 ntBASIC7□□□□□ -1.29
CUEDC1Q9NWM3 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
CUEDC1Q9NWM3 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CUEDC1Q9NWM3 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 NF1P8-201ENST00000415351 1461 ntBASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 OR5J1P-201ENST00000313544 939 ntBASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 MIR369-201ENST00000362155 70 ntBASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 RPL24P2-201ENST00000421023 475 ntBASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 AL589794.1-201ENST00000424971 390 ntBASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 AL604028.2-201ENST00000437848 788 ntBASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 AL356133.1-201ENST00000444762 372 ntBASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 AC132479.1-201ENST00000449160 144 ntBASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 AL590365.1-201ENST00000450788 243 ntBASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 VN1R6P-201ENST00000458417 907 ntBASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 RN7SL836P-201ENST00000476140 296 ntBASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 RN7SL705P-201ENST00000481678 294 ntBASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 IGLVI-42-201ENST00000522485 381 ntBASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 OR5BN1P-201ENST00000532955 829 ntBASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 AC087241.2-201ENST00000535801 324 ntBASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 ZNF322P1-201ENST00000568013 1209 ntBASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 AC010653.1-201ENST00000571108 881 ntBASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 AC006270.2-201ENST00000578523 652 ntBASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 AC125494.2-201ENST00000602431 657 ntBASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 AC011816.2-201ENST00000607089 556 ntBASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 AC104010.1-201ENST00000616889 150 ntBASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 uc_338.9-201ENST00000617424 182 ntBASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 AC074140.1-201ENST00000621617 208 ntBASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 AL589993.1-201ENST00000407450 2524 ntBASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 AC018628.1-201ENST00000624147 3819 ntBASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 AC091046.3-201ENST00000631455 1574 ntBASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CUEDC1Q9NWM3 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms