Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.01□□□□□ -1.61
SIX2Q9NPC8 PA2G4P6-201ENST00000438325 1197 ntBASIC5.01□□□□□ -1.61
SIX2Q9NPC8 RPL36AP15-201ENST00000444514 266 ntBASIC5.01□□□□□ -1.61
SIX2Q9NPC8 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.01□□□□□ -1.61
SIX2Q9NPC8 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.01□□□□□ -1.61
SIX2Q9NPC8 ATP5G1P3-201ENST00000463301 410 ntBASIC5.01□□□□□ -1.61
SIX2Q9NPC8 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.01□□□□□ -1.61
SIX2Q9NPC8 AC074386.1-201ENST00000476560 767 ntBASIC5.01□□□□□ -1.61
SIX2Q9NPC8 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC5.01□□□□□ -1.61
SIX2Q9NPC8 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.01□□□□□ -1.61
SIX2Q9NPC8 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.01□□□□□ -1.61
SIX2Q9NPC8 AC008638.1-201ENST00000506035 866 ntBASIC5.01□□□□□ -1.61
SIX2Q9NPC8 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SIX2Q9NPC8 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC5.01□□□□□ -1.61
SIX2Q9NPC8 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.01□□□□□ -1.61
SIX2Q9NPC8 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.01□□□□□ -1.61
SIX2Q9NPC8 AC027281.1-201ENST00000574178 758 ntBASIC5.01□□□□□ -1.61
SIX2Q9NPC8 RN7SL652P-201ENST00000577769 300 ntBASIC5.01□□□□□ -1.61
SIX2Q9NPC8 AC106858.1-201ENST00000637497 429 ntBASIC5.01□□□□□ -1.61
SIX2Q9NPC8 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SIX2Q9NPC8 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
SIX2Q9NPC8 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SIX2Q9NPC8 SMG1P4-204ENST00000523028 4131 ntBASIC5.01□□□□□ -1.61
SIX2Q9NPC8 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
SIX2Q9NPC8 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SIX2Q9NPC8 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
SIX2Q9NPC8 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5□□□□□ -1.61
SIX2Q9NPC8 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SIX2Q9NPC8 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SIX2Q9NPC8 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SIX2Q9NPC8 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
SIX2Q9NPC8 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5□□□□□ -1.61
SIX2Q9NPC8 RNU4-39P-201ENST00000362455 127 ntBASIC5□□□□□ -1.61
SIX2Q9NPC8 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5□□□□□ -1.61
SIX2Q9NPC8 RN7SKP167-201ENST00000411047 285 ntBASIC5□□□□□ -1.61
SIX2Q9NPC8 Z68694.1-201ENST00000413929 841 ntBASIC5□□□□□ -1.61
SIX2Q9NPC8 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5□□□□□ -1.61
SIX2Q9NPC8 H2AFZP5-201ENST00000446960 382 ntBASIC5□□□□□ -1.61
SIX2Q9NPC8 VN1R48P-201ENST00000448149 1036 ntBASIC5□□□□□ -1.61
SIX2Q9NPC8 OR1H1P-201ENST00000448731 937 ntBASIC5□□□□□ -1.61
SIX2Q9NPC8 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5□□□□□ -1.61
SIX2Q9NPC8 AC025768.1-201ENST00000510057 267 ntBASIC5□□□□□ -1.61
SIX2Q9NPC8 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5□□□□□ -1.61
SIX2Q9NPC8 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5□□□□□ -1.61
SIX2Q9NPC8 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5□□□□□ -1.61
SIX2Q9NPC8 RN7SKP276-201ENST00000516242 268 ntBASIC5□□□□□ -1.61
SIX2Q9NPC8 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC5□□□□□ -1.61
SIX2Q9NPC8 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5□□□□□ -1.61
SIX2Q9NPC8 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5□□□□□ -1.61
SIX2Q9NPC8 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5□□□□□ -1.61
SIX2Q9NPC8 MIR4646-201ENST00000580775 63 ntBASIC5□□□□□ -1.61
SIX2Q9NPC8 MIR3667-201ENST00000581025 74 ntBASIC5□□□□□ -1.61
SIX2Q9NPC8 MIR4737-201ENST00000583979 81 ntBASIC5□□□□□ -1.61
SIX2Q9NPC8 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5□□□□□ -1.61
SIX2Q9NPC8 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5□□□□□ -1.61
SIX2Q9NPC8 AC140113.4-201ENST00000622087 222 ntBASIC5□□□□□ -1.61
SIX2Q9NPC8 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
SIX2Q9NPC8 AC083899.2-201ENST00000423285 1376 ntBASIC5□□□□□ -1.61
SIX2Q9NPC8 HSPD1P14-201ENST00000432666 1618 ntBASIC5□□□□□ -1.61
SIX2Q9NPC8 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5□□□□□ -1.61
SIX2Q9NPC8 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5□□□□□ -1.61
SIX2Q9NPC8 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5□□□□□ -1.61
SIX2Q9NPC8 AC104260.2-201ENST00000623551 3497 ntBASIC5□□□□□ -1.61
SIX2Q9NPC8 MUC2-202ENST00000613187 4845 ntBASIC5□□□□□ -1.61
SIX2Q9NPC8 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SIX2Q9NPC8 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SIX2Q9NPC8 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SIX2Q9NPC8 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SIX2Q9NPC8 AC005005.4-201ENST00000623789 16698 ntBASIC4.99□□□□□ -1.61
SIX2Q9NPC8 AC010928.1-201ENST00000592477 1447 ntBASIC4.99□□□□□ -1.61
SIX2Q9NPC8 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.99□□□□□ -1.61
SIX2Q9NPC8 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SIX2Q9NPC8 AC112255.1-201ENST00000624070 2493 ntBASIC4.99□□□□□ -1.61
SIX2Q9NPC8 AP001002.1-201ENST00000625148 1513 ntBASIC4.99□□□□□ -1.61
SIX2Q9NPC8 AC087565.3-202ENST00000642085 1603 ntBASIC4.99□□□□□ -1.61
SIX2Q9NPC8 RNU6-1331P-201ENST00000363658 106 ntBASIC4.99□□□□□ -1.61
SIX2Q9NPC8 SNORA27.3-201ENST00000364937 134 ntBASIC4.99□□□□□ -1.61
SIX2Q9NPC8 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SIX2Q9NPC8 MIR195-201ENST00000385194 87 ntBASIC4.99□□□□□ -1.61
SIX2Q9NPC8 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SIX2Q9NPC8 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.99□□□□□ -1.61
SIX2Q9NPC8 HSFY1P1-201ENST00000423928 1178 ntBASIC4.99□□□□□ -1.61
SIX2Q9NPC8 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.99□□□□□ -1.61
SIX2Q9NPC8 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.99□□□□□ -1.61
SIX2Q9NPC8 MTND2P25-201ENST00000449028 610 ntBASIC4.99□□□□□ -1.61
SIX2Q9NPC8 RPL7P61-201ENST00000451721 751 ntBASIC4.99□□□□□ -1.61
SIX2Q9NPC8 HIGD1AP8-201ENST00000453927 274 ntBASIC4.99□□□□□ -1.61
SIX2Q9NPC8 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.99□□□□□ -1.61
SIX2Q9NPC8 RPS4XP12-201ENST00000461747 709 ntBASIC4.99□□□□□ -1.61
SIX2Q9NPC8 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.99□□□□□ -1.61
SIX2Q9NPC8 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.99□□□□□ -1.61
SIX2Q9NPC8 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SIX2Q9NPC8 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.99□□□□□ -1.61
SIX2Q9NPC8 FTH1P11-201ENST00000517577 551 ntBASIC4.99□□□□□ -1.61
SIX2Q9NPC8 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SIX2Q9NPC8 SOX5P1-201ENST00000524155 1127 ntBASIC4.99□□□□□ -1.61
SIX2Q9NPC8 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.99□□□□□ -1.61
SIX2Q9NPC8 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.99□□□□□ -1.61
SIX2Q9NPC8 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.99□□□□□ -1.61
SIX2Q9NPC8 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms